Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00662 ATGTGCATGGGTGTAACAGCTGGTGCTTACATCCTCACACTATTTGCTATGAAATACAAAGAACGAGTGCTTGGATTGATTCTTGTTTCACCGATTTGTAAAGGACCTTCATGGACTGAATGGATTTACAACAAGGTCTTGATGAACTTATTGTACTTCTATGGTATGTGCGGTTTACTGAAGGAATGCCTCCTGCAACGTTACTTCAGTAAGGAGCTTAGATGCAGTATTGAGGGATCAGAATCAGAAGTAATACTAACTTGCCGAAGAAATATATTTGTTGCAGGAACAGACACAAGCACGTACACACTAGAATGGGCAATGGCAGAGTTAATGCACAATCCAGAAATCATGTCAAAAGTACAAAATGAACTCGAACAAGTTGTTGGCAAAGGTATTCCAGTCGAAGAAACAGACATAGCCAAATTACCATACATGCAAGCAGTTATAAAAGAGACGTTTCGTGTACATCCACCAGTTCCGTTATTACTACCTCGCAAAGCAGAAACAGATGTTGAAATTGGTGACTACATTATTCCAAAAGATGCACAAGTTTTGGTTAATGCTTGGGTTATTGGCAGAGATCCAAGTAAATGGGAGAATCCTAATGCTTTTGTGCCGGAGAGATTTTTCAATAGTGAGATTGATTTTAAAGGACATCATTTTGAGCTTATTCCATTTGGGTCTGGTAGAAGAATTTGTCCTGGTTTGCCTTTGGCTATTAGAATGTTGCCTTTGATGTTGAGATCTTTGGTTAATTGCTTTGATTGGAGACTTGAAGATGGATTGAATGTCGATGATTTGAATAAGGAAGATGAGTATGGGATTACCTTGGAAAAATCTCAACCTGTGAGAATTGTTCCAATCAAATTGACTAAGCAATAA 885 0.3831 MCMGVTAGAYILTLFAMKYKERVLGLILVSPICKGPSWTEWIYNKVLMNLLYFYGMCGLLKECLLQRYFSKELRCSIEGSESEVILTCRRNIFVAGTDTSTYTLEWAMAELMHNPEIMSKVQNELEQVVGKGIPVEETDIAKLPYMQAVIKETFRVHPPVPLLLPRKAETDVEIGDYIIPKDAQVLVNAWVIGRDPSKWENPNAFVPERFFNSEIDFKGHHFELIPFGSGRRICPGLPLAIRMLPLMLRSLVNCFDWRLEDGLNVDDLNKEDEYGITLEKSQPVRIVPIKLTKQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00662 294 Gene3D Cytochrome P450 60 293 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00662 294 PRINTS E-class P450 group I signature 147 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00662 294 PRINTS E-class P450 group I signature 104 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00662 294 PRINTS E-class P450 group I signature 224 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00662 294 PRINTS E-class P450 group I signature 84 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00662 294 PRINTS E-class P450 group I signature 234 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00662 294 PRINTS E-class P450 group I signature 188 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00662 294 Pfam Cytochrome P450 81 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00662 294 SUPERFAMILY alpha/beta-Hydrolases 3 82 IPR029058 -
Vifa5g00662 294 Pfam Ndr family 1 92 IPR004142 -
Vifa5g00662 294 SUPERFAMILY Cytochrome P450 82 287 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00662 294 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 227 236 IPR017972 GO:0005506|GO:0016705
Vifa5g00662 294 PRINTS P450 superfamily signature 234 245 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00662 294 PRINTS P450 superfamily signature 225 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00662 294 PRINTS P450 superfamily signature 95 112 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00662 294 PRINTS P450 superfamily signature 148 159 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00662 294 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 84 290 - -
Vifa5g00662 294 FunFam Geraniol 8-hydroxylase 69 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00662 Vifa-Chr5 175310880 175312446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00662 66 290 Cytochrome P450 AT2G45570 52.838 1.72e-85 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00662 - - cave:132173603 296.589