Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa5g00648 | ATGCCTCCAAAGAAGAAGCAGCAGCGAGAAGAAAAACCGGAAAACCCTAAAACCCTTCCAAAGAAGAAGACTAACAACACTTCATCAGTGTCTTCTTCTACTCCATTTACTAAGAAACCTATTCCACAACCTTCCAAATACGGTATTCAACACTTCTTCGATCGCCACACAATCCAACACTCTCAGAAACCGGTTGATTCCGTTTTTCACCCACCGCCGGAGAAACCTAACGACGTGAAGGCTCCGGCGGATCCATCTTCACAGGATGTTACTCCTGATAATCTGCTCTTGCCGGTGGCCACTGATCCTGTCGAGGTGTCTCCGGAGATTTCGAAGTCCATGTCACGCAAGCGGTTCAAATTCTCACCGGGGATGTTTATCAAGCAAAGTCAGGATGATGGGGCTGATGAGGTTACATGGAAGATATCTCCAGTGAATGAAAGGCTTCAAGCAGTTTCAAAATACACGCCTAAGATGATTCAAGCATTGGCTGATTCTTCGAGGACGAGCATGTTGCAAATTCGCCGCTGCTCAGAAGATAAGACTTCTCTCGGCAAAGGCGATAAGGTTGAAGAGTTGCTAATTACACCAACTCCTACTGCATCTGCAAAAGCTCCGTTGTCATTGAGTAAATTAGGCCTGAAAAAATTAAACCGTGACCGTAATGTGGGAGTTAATGGAAATCCAACTACTGTGAGCAACTCTTCTGGAGTGGCTGGTGAAAGAAATCCCTTCAGAACTCCACCATCTATGTCTTGTCGCCTAGATAAGCTTGCCAAGGATGTGGAGCACATTGGACCATCTGACCAACCTTTTTTGAGACAGCACAAAAAGGCATTGCTTGAACTTTTAGATCAAGTTGAAGATGCAATTGGTGTTGATAGTGATACAGTTTGTGATAAAACCACTCATTCCTTTAAATCACAAGATGGCATTGCTAACGAGCTCCCTGTCAGAGTCAACCATCTAGTTGAAAGGACTGAATCACATATACCTAAAGAGGTTGTTGGTGATTTCTCCAACTCTAATTATTTGGTTTTGGAGGCATCTGAAAATTTGCAACCTGCTGGTTCATCTGCTGCTGAAGGTCCATGCAAGGTGCTTCGTTTACTAAATGAACAAACTGGAGAAGAGCGAGCTGTAAACTTGTGGGATGAATGGTCCTACAGTGTAATTGCACCTGGAGATACTGTGAACGTAATTGGTCAATTTGATGAAGGTGGATACTGTGATATTAATCATGCTAACAATTTTTTGATTGTACACCCAGATATTCTTATGTCTGGAACACGGGTTGCTGCCAGTTTTAGTTGCCCAAGGAGAACTGTCTTAGACGAGAGGCTAAAAAACAATGAGTACTCAACTGCAGCTTTATATGGAACCTTGCTTCACCAAATATTTCAGGCTGGGCTTACAAATGACAATCCTACAATAAACTTCTTGGAATGTTACATAGAAGTTGTTTTAAGAAGAAATGTTGAAAGTTTATTTGCATGTGGAGTTAATGAAAAGGATGTTCGCAAAATCATGATTGATGGTATCCCTAAACTATACAATTGGATCATGCTGTTCAGAACTATTGAGGAAAGAGAAGATCCTAATGTTAATTTTGGATGTGCTAATGGAATGAAGAACATTGGCATATCTGAGGTAATTGATATTGAAGAAATGGTATGGGCACCAAAATATGGTTTGAAAGGGATGATTGATGCTTCACTTAGAGTGAAGGTTCAATCTAGAAAAGATAAACCAGAGGAGAAGATCATGCCATTAGAGTTTAAAACTGGAAAAGCACCCAGTAGCCAGACATCCATAGAACATAATGCCCAAGTAATTTTGTACACTCTACTGATGTCTGAAAGGTACCAGAAGACCATTGATTCTGGTCTTCTGTATTATCTCCAAACAGATCAGACACAGGGTATTACAGTTCAAAGATCCGACTTAGTTGGGTTAATAATACGGCGTAATGAGCTAGCAAGTGAAATTCTCAAGGCATTAGTCTTGCAGCAACTTCCACCAGTGTTACAGAGTCCTAGCATGTGCAGAGGTTGTCGCCATCTTAATGCCTGTAGCATTTATCATAAGGCGCATGGTGGAAGCATCGAGAGCAAAGAATTGGGAGATGTTTTCGATTCCAATACTAATCACTTGACTTCATCTCATTTGAAGTTCCTCTGCCATTGGGACCATTTGATTGACTTAGAAGCTAAAGGGACTGAGTTTTTAAAGAAAGATATGTGGCGATCATATAATTTGAGGACTCGCAGTGCCGGTGGTGTTTCTTCTATTGTTATTGATGCTTCACAAGGAATACCTTATTCAAAATCTCACAAAGATAATCATTTTGTTTATCGTTTTGTACCGCAAGATACTTCTTGCCCCTCTATAGTTTCTGATGATGATCCTTCTAGTGTCTCATTGAAAATTGATTTAGATTTCACACTGAGAAGTGGTGACTTTGTGATATTGAGTAACGAGTCAAGCCATCAAACTATTGCAAGAGGAGTGATTTCAGATACTAGCAAGAATCATATATCTGTTTCCTTTTCCAAGCTTTTGAGAATTCCCGGGAGGTCTTCCACAGAACATGATCTCCTTAAGCAGGTTTGGAGAATTGACAAAGATGAAGCTGTGACCTTGTTTGCTATTATGAGGTTTAATCTAGTACAACTTTTTCTACAAAATGATCAAAGTGCTCATCTTCGGAGGATGATTGTTGACCTTGAGGCTCCTAGATTTGACAGTGGTTCTATAGTTAGCCAGGATCCTGCAATATCTTACGTTTGGTCTGAGCAGAGTTTGAATGATGATCAACGTAGAGCTATTCTCAAGATACTTGTGGCAAAAGATTATGCACTTATCTTAGGGATGCCTGGAACAGGGAAGACATCCACCATGGTCCATGCTGTGAAAGCCTTGTTGATTAGAGGCACATCCATTTTACTGACAGCCTATACAAATTCTGCTGTTGATAATTTACTAATCAAATTAAAAGCTCAGGGCATTGATTTTGTTCGGATTGGAAGACATGAAGCAGTGAATGAAGAGGTCAGAGAGCACTGCCTCTCAGAAACAAATGTACAGAGTGTTGAAGATATCAAAATAAGGTTAGAACAAGTCAAAGTTGTTGCAGTTACATGTTTGGGCATTTCCAGTCCCCTGCTTGCCAACAAGAGATTTGATGTATGCATTATGGATGAAGCCGGACAGACAACTCTGCCGGTGTCCTTGGGCCCTCTAAGATTTGCTTCAATGTTTGTTCTTGTTGGGGATCATTATCAACTGCCACCACTTGTCCAAAGTACAGAGGCCCTAGAGAATGGCATGGGGATGAGTTTGTTTTGCAGGCTTTCAGAAGCTCATCCACAGGCAATTTCAGCTTTGCAGAGTCAGTACCGTATGTGTCAGGGTATCATGGACTTGTCAAATGTCTTGATATATGGTGACAGATTGAGGTGTGGTTCATCTGAGATAGCTAATGCCAAACTTGAGTTTTCTGGCTTAAGCTGCTGTTTGCCTTGGCTGGAAGATGTTTTGAATCCTGGAAGGCCAGTGATATTTATTGATACTGATATGTTGCCTGCCTTAGAGGAAAGAGATCAGAAAGTTGTAAATAACCCTACTGAAGCTCACATAATTGCCGAGGTTGCAAAGGAATTGGTTAACAATGGAATTGGAGGAGAGCACATTGGCATTATTACACCCTATAACTCACAGGCAAACCTCATCCGACTTGCTACTTGCATAACATCCTTGGAGATACATACCATTGACAAATACCAGGGTAGAGATAAAGACTGTATATTAGTATCTTTTGTACGGTCTTGTAAGAACCCAACAAGCTGCGTGGCTTCTCTACTCGGAGACTGGCACAGGATAAATGTGGCCCTTACTCGTGCTAAGAGAAAGTTGATCATGGTGGGGTCTCGCAAAACTCTAATGAAGGTTCCACTACTGAAGCTTCTCATTAAGAAAGTTGAAGAGCAATCTGGAATTTTGACCTTGTCTAAGAACGATATCTATAGAAAAGGGGAGCTAATTAGATGTTCTCAAATTGCTTGTTCAAAATCAAAACAAACATTAGATGTTCACAATTGA | 4101 | 0.4094 | MPPKKKQQREEKPENPKTLPKKKTNNTSSVSSSTPFTKKPIPQPSKYGIQHFFDRHTIQHSQKPVDSVFHPPPEKPNDVKAPADPSSQDVTPDNLLLPVATDPVEVSPEISKSMSRKRFKFSPGMFIKQSQDDGADEVTWKISPVNERLQAVSKYTPKMIQALADSSRTSMLQIRRCSEDKTSLGKGDKVEELLITPTPTASAKAPLSLSKLGLKKLNRDRNVGVNGNPTTVSNSSGVAGERNPFRTPPSMSCRLDKLAKDVEHIGPSDQPFLRQHKKALLELLDQVEDAIGVDSDTVCDKTTHSFKSQDGIANELPVRVNHLVERTESHIPKEVVGDFSNSNYLVLEASENLQPAGSSAAEGPCKVLRLLNEQTGEERAVNLWDEWSYSVIAPGDTVNVIGQFDEGGYCDINHANNFLIVHPDILMSGTRVAASFSCPRRTVLDERLKNNEYSTAALYGTLLHQIFQAGLTNDNPTINFLECYIEVVLRRNVESLFACGVNEKDVRKIMIDGIPKLYNWIMLFRTIEEREDPNVNFGCANGMKNIGISEVIDIEEMVWAPKYGLKGMIDASLRVKVQSRKDKPEEKIMPLEFKTGKAPSSQTSIEHNAQVILYTLLMSERYQKTIDSGLLYYLQTDQTQGITVQRSDLVGLIIRRNELASEILKALVLQQLPPVLQSPSMCRGCRHLNACSIYHKAHGGSIESKELGDVFDSNTNHLTSSHLKFLCHWDHLIDLEAKGTEFLKKDMWRSYNLRTRSAGGVSSIVIDASQGIPYSKSHKDNHFVYRFVPQDTSCPSIVSDDDPSSVSLKIDLDFTLRSGDFVILSNESSHQTIARGVISDTSKNHISVSFSKLLRIPGRSSTEHDLLKQVWRIDKDEAVTLFAIMRFNLVQLFLQNDQSAHLRRMIVDLEAPRFDSGSIVSQDPAISYVWSEQSLNDDQRRAILKILVAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRHEAVNEEVREHCLSETNVQSVEDIKIRLEQVKVVAVTCLGISSPLLANKRFDVCIMDEAGQTTLPVSLGPLRFASMFVLVGDHYQLPPLVQSTEALENGMGMSLFCRLSEAHPQAISALQSQYRMCQGIMDLSNVLIYGDRLRCGSSEIANAKLEFSGLSCCLPWLEDVLNPGRPVIFIDTDMLPALEERDQKVVNNPTEAHIIAEVAKELVNNGIGGEHIGIITPYNSQANLIRLATCITSLEIHTIDKYQGRDKDCILVSFVRSCKNPTSCVASLLGDWHRINVALTRAKRKLIMVGSRKTLMKVPLLKLLIKKVEEQSGILTLSKNDIYRKGELIRCSQIACSKSKQTLDVHN | 1366 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa5g00648 | 1366 | CDD | DEXXQc_DNA2 | 934 | 1134 | IPR026851 | GO:0017116 | |
| Vifa5g00648 | 1366 | FunFam | DNA replication helicase | 1133 | 1346 | - | - | |
| Vifa5g00648 | 1366 | PANTHER | DNA2/NAM7 HELICASE FAMILY | 199 | 1329 | IPR045055 | - | |
| Vifa5g00648 | 1366 | Pfam | Domain of unknown function DUF83 | 584 | 692 | IPR022765 | - | |
| Vifa5g00648 | 1366 | Pfam | DNA replication factor Dna2 | 373 | 574 | IPR014808 | - | |
| Vifa5g00648 | 1366 | MobiDBLite | consensus disorder prediction | 220 | 250 | - | - | |
| Vifa5g00648 | 1366 | FunFam | DNA replication helicase Dna2 | 536 | 692 | - | - | |
| Vifa5g00648 | 1366 | Gene3D | - | 1133 | 1340 | IPR027417 | - | |
| Vifa5g00648 | 1366 | MobiDBLite | consensus disorder prediction | 20 | 40 | - | - | |
| Vifa5g00648 | 1366 | CDD | DNA2_N-like | 428 | 661 | - | - |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa5g00648 | K10742 | - | gmx:100799415 | 1776.91 |
Showing 1 to 1 of 1 entries