Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00498 ATGGCACAACTAAACCTAACAATCATGGTCATTTTCCTTTCTATATTTTCATGTCTTGCGCGAAAGGAGCAATCATTAGCCCGTCATAACTCCCAAACTATCCAAAACCAAACAAAAACTCAAACTCAAACTCAAACTCAAACCCGATCAAAAACAATGGAGTACATAGAGTCTTCATGCCAAGGAACGCGGTATCCAGATCTATGCATCCGTTCGTTAGCCTCATTCGCCAAATACTCCACCGTAGACGGACCTGACCACTTAGCCCACATAGCCCTTTCCGTGAGCCTAGTGAAAGCACTTCAAACAAGAGGTTACTTATTAAAAATAGTCAAAGAAATCGAAGAGATCAACAACGGGAGCCAGCCAGGTTACGCGTACTTAACCATGCAAGATTGTGAGAAACAAATCAGCGATAGTGTTGATCAACTTAGCCAAGCGATTAAAGAGCTTCGTAGGGTGAACAAAGGTACGATTATTAATGATAAAATGTTGTGGCATATAAGTAATGTTGAGACATGGGTGAGTACTGCTTTAACAGATGCTAGCTATTGTGTTCAATCGTTTCCTGGTCATAGGATGAGTAAGAGGACTGCTACTATTAAGGTTAAGGCACAAAATGTTGCTGAGGTTACTAGTAATGGACTTGCTTTGTTTCATAGATATGCTGCTAAGTATAGAGCAGCAGCAGCTGCTAGAGCTGCCAAGAAATTACCATGA 720 0.4111 MAQLNLTIMVIFLSIFSCLARKEQSLARHNSQTIQNQTKTQTQTQTQTRSKTMEYIESSCQGTRYPDLCIRSLASFAKYSTVDGPDHLAHIALSVSLVKALQTRGYLLKIVKEIEEINNGSQPGYAYLTMQDCEKQISDSVDQLSQAIKELRRVNKGTIINDKMLWHISNVETWVSTALTDASYCVQSFPGHRMSKRTATIKVKAQNVAEVTSNGLALFHRYAAKYRAAAAARAAKKLP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00498 239 Pfam Plant invertase/pectin methylesterase inhibitor 55 218 IPR006501 GO:0004857
Vifa5g00498 239 FunFam Pectinesterase inhibitor 3 51 223 - -
Vifa5g00498 239 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 221 IPR035513 -
Vifa5g00498 239 SMART PMEI_2 51 218 IPR006501 GO:0004857
Vifa5g00498 239 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 222 IPR035513 -
Vifa5g00498 239 CDD PMEI-like_3 58 220 - -
Vifa5g00498 239 Coils Coil 130 150 - -
Vifa5g00498 239 NCBIfam pectinesterase inhibitor domain 46 221 IPR006501 GO:0004857
Vifa5g00498 239 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 218 - -
Vifa5g00498 239 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00498 Vifa-Chr5 117134247 117134966 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00498 51 219 Carbohydrate Esterase AT3G49220 26.163 5.57e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00498 - - tpra:123890145 363.999