Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00497 ATGGAACCACCACAGGAGATTTCAGGAGGAGGAGGAGCAGAAACACTTAAAAATATGCCTCCTGGATCTTCGATTTCTATTGCATATCACCCGAATTTTGGACCTCATGATGATCTCATTGTTCTAGAGCTCGATGAGAAACTGATCCCGGATGTTTTGAATGAAAGGATGGTCTTAAGAGGACAGCCTGACGAGGATGCGGTTCTTTGTACTCAATCAAAAACATATGCTATGAAATTTGTTGGAACTTCCAATTCTGTTTTGCTTGTACCACCAGAAAATCAATCAGAATCGTATGAAAATCAGCAGAAGAATGATATTAACAATACTGACGAGAAAGCTGTTGCACGTATAATAAAAGTCGTACCTGGTAGTTTGGAGCTTATTGAGGTGTCCCCCAAACTTGATAAACTCAAATTGCTTCTTTCAGAGAACACTTACAAATTTGATGAAAATGACATGGAAATTTTAGAAGAGAATCAGGAATCAAGAGTGGGATTATATAACTGGAATGATCTTATAGACAATATTCAAGCTAGTGACGAGGAATTAAGATTTGGATTGCAGGCTCTTTCTGCCGTGGAGATTAATGGGTATTGGAGATTAGTTGATGAGAGTTACATGGACATGATTCTGGGAGTGCTTTTGAAAAATTCAGTGTTGAATGACCGGTCACTCAATGCTCTAAATGAAGATGAAGTTGTGAATATGCTGGAATCAGACGGGTTTCCGATGGTTCTTGCAAGGCATTGCTTGCACTTATATGCCAACCAAGTAAAAGAAAATGATTCCATGGAAAGCTGTGTGTGGAAGTTGGATGAGAAGCGGGTATGCATACACTATGCAAGAGAAATCCTAAAAGGAGGTAAGAGGAAGTTAGAGAGTTTTATGGAAGAATGGAGGAAGAAGACTCCAGATAAAATGCAGCCATCTTTTGATCTTATGGAAGGAGAGGTATTGACAGAGAAACTTGGAGTTGAGACATGGGTTCGTGCCTTCCGTGTCTCTTCTTTGCCTTCCACTCCAGCTGAGCGTTTCTCCATTCTTTTCAGAGAGCGTGCAAAATGGGATTGGAAAGATCTGCAGCCCTATATCAGGGATCTGAATGTACCAGGTCTTTCTGCTGAAGGTTTACTACTCAAATACACTCGAAAGACACAACCGTCACCTAATCAAGATCCAGTTTTCAGTGCAAGATAA 1200 0.4033 MEPPQEISGGGGAETLKNMPPGSSISIAYHPNFGPHDDLIVLELDEKLIPDVLNERMVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLVPPENQSESYENQQKNDINNTDEKAVARIIKVVPGSLELIEVSPKLDKLKLLLSENTYKFDENDMEILEENQESRVGLYNWNDLIDNIQASDEELRFGLQALSAVEINGYWRLVDESYMDMILGVLLKNSVLNDRSLNALNEDEVVNMLESDGFPMVLARHCLHLYANQVKENDSMESCVWKLDEKRVCIHYAREILKGGKRKLESFMEEWRKKTPDKMQPSFDLMEGEVLTEKLGVETWVRAFRVSSLPSTPAERFSILFRERAKWDWKDLQPYIRDLNVPGLSAEGLLLKYTRKTQPSPNQDPVFSAR 399
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00497 399 Pfam Sister chromatid cohesion protein Dcc1 41 365 IPR019128 GO:0007064|GO:0031390
Vifa5g00497 399 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 13 399 IPR019128 GO:0007064|GO:0031390
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00497 11 399 C3H Transcription Factor Family AT2G44580 54.177 1.86e-154 439
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00497 K11271 - gmx:100817511 622.468