Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00481 ATGGGTTCCGTAGAGGACGATTCTTCGCGTTTGGAAGAAGCGCTTATTCAGGATGAAGAAAGTAAGCTATACACAAGAGATGGCTCGGTCGACTTTAAAGGGAGGCCTGTGCTTAAGAAGAATACTGGAAATTGGAAAGCTTGCCCATTTATCCTAGCTATCAGTGCTTCAACTTCAGAGTTCCGTGGTGATGATCCGGAGAAGGATCAGATCCATGCGGCAACGCTACTCAGTTTGGGAGGACATCAAATTGATTCCAATAAGGATGATGTTGCGGAGGCGCTTTCGAGGCAGTATTGGGAATACAATGTGCTTGACTATGAAGAGAAAGTAGTTGATGGTTTTTATGACATATATGGCCTCTATAATGACCCAGTAATGCAAGGAAAGATGCCATCTCTAGCTGATCTTGAAACAAACTCAGGTGGTTCTAGCTTTGAAGTAGTCATAGTTAATAGAACAATTGATCCTGCCCTGGACGAGATGGTGCAAATTGCACACTGTATAGCATTGGACTGCCCTGTCTCTAAGATTGGTATTTTGGTGCAAAGGCTTGCTGAACTTGTTACTAGCCATATGGGCGGCCCTGTAAAAGATGCTAATATTATATTAACAAAATGGACAGAAAGAAGTACAGAATTAAGGACATCTCTTCACACAAGTGTATTACCTCTTGGGTCCTTAGATATTGGGCTCTCTAGGCATCGCGCTTTACTTTTCAAGATATTAGCAGACAACATTCAGATGCCTTATAGACTGGTTAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAATTAGATGATGAAAGGGAGTTTTTAGTTGATCTCATGGCTGCTCCTGGAACACTCATCCCAGCTGATATTTTAAATGCGAAGGATAATGCCTTTAAGTCTTACAACCCCAAGAATGTGCCAGAGTCAGAAGGGAAACCAGACTTGAATTGTGTTACAACTAGGACTGGGAAGCGATCTAGGCCATGTAGTTGGAAGAGGCGTAAATGCAAAAAGCAGAAGCAATCAACTGCTGAAGATGTTGATCTAAATATTCAATGCAAGTTGCTTCCAAATAATACAGATTGCATGCTTGCTAATCAACAGCATGGTAACACCAACTAA 1134 0.4153 MGSVEDDSSRLEEALIQDEESKLYTRDGSVDFKGRPVLKKNTGNWKACPFILAISASTSEFRGDDPEKDQIHAATLLSLGGHQIDSNKDDVAEALSRQYWEYNVLDYEEKVVDGFYDIYGLYNDPVMQGKMPSLADLETNSGGSSFEVVIVNRTIDPALDEMVQIAHCIALDCPVSKIGILVQRLAELVTSHMGGPVKDANIILTKWTERSTELRTSLHTSVLPLGSLDIGLSRHRALLFKILADNIQMPYRLVKGSHYTGVEDDAVNIIKLDDEREFLVDLMAAPGTLIPADILNAKDNAFKSYNPKNVPESEGKPDLNCVTTRTGKRSRPCSWKRRKCKKQKQSTAEDVDLNIQCKLLPNNTDCMLANQQHGNTN 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00481 377 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 95 294 - -
Vifa5g00481 377 Pfam Ethylene-responsive protein kinase Le-CTR1 92 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00481 Vifa-Chr5 111832644 111833879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00481 52 306 MAP Kinase Kinase Kinase AT1G08720 61.776 4.03e-106 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00481 - - aprc:113870732 451.055