Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g00477 | ATGACATATTTCTATTTCTATCTCCATCTTTTTCTTCTTTCTTTGTTTTTCTCCATCCACACTACTCATCAGCTACAATTTTCTCAAACTCAAGTCCTCTTACAGTTAAGAAAATATCTTCAATACCCTACCTCCTTACAGATCTTTCAAAATTACAATGCTCACCTTTGTACCCTCACTCCATCTCAACACTTGAGTATTAAATGTGAGGACAATTCAGTAACTGAACTCAAAATCATGGGAGACAAAACCAATAAACATGGAAAGGTTTCCAGTTTCAATGGCATTGCAGTTCCAAATCAAACACTTTCCAAAACTTTCTCTATTGATTCTTTTGTCACAACATTGACAAGGTTAACAAGTTTAAGAGTACTTAGTTTGGTTTCTTTGGGAATTTGGGGTCCACTTCCTGATAAGATTCATAGGCTTACTTTGCTTCAAGTTTTGGATTTGAGTTCTAATTTCTTATTTGGTTCTATTCCACCAAAGATAGCTACTTTCATGAATCTTCAAATACTAACACTTGATGGAAACTACTTCAATACCACAATGCCTGATTTTTTTGAACCTTTGTCTAGTTTAAGTATCTTGAGTTTCAAAAACAATCAGTTAAAAGGCTCATTTCCTTTTTCACTATGCAAAATCAAGAATCTTACTCATGTTTCCTTCTCACACAATGAACTATCTGGTGCATTGCCGAATCTCACCGTGCTTTCGAGGTTACATGTATTGGATTTGATGGAAAATAGATTTGATTCTGAGTTACCGTTGATGCCAAAATCGCTTGTCACGGTATTGCTAAGTAAGAACTCATTCTCAGGTGAAATTCCTATTCAGTTTGGTCAACTGAGTCAGCTTCAAAATCTTGATCTTTCTTCGAATCGTCTATCCGGGGTTCCTCCTTCCTTGTTGTTTTCTTTGACAAACATCAGTTATTTGAATTTAGCAAACAATGTGCTAAGTGGTTCAATTCCAAAGAAACTGAAATGTGGAAGCAAACTTGGTTTTGTGGATATTTCTGGTAACATGTTAAGTGGTTTACTTCCTTCTTGCTTGGAAAGTATATCTGACAGAAGAGTTGTTAGATTTGGTGGAAACTGTTTGTCTGTTCATTCTCAACCTCAGGATCAGAATCAGAAACATGGTTCTTATTGTGAAGAATCTAGTTCAGGAAAGATGAAATTTTGGAGATGGGAAATTGATGCTGCAATTGCTATCATTCTTGTAGTTTTTCTTTTATTGTTAGCTTTTGGAGTTTTCTTTTACAGAAAGTATCATTCAAGAGAGATTTATAGGCATGAGATGTTGCCAAAGATTGTCCAAGATAATAATAACTCAACAACAGGAGTTTCCTCTGAACTTCTTGCCAGTGCAAGATATATTTCTCAAAAAATGAAGCTAGGGACACAAACTAGTACAACATGTAGACACTTTTCAATTCAAGAGTTGAAAGAAATCACAAGAAACTTTGATCTATCCGCTTATATTGGCGAAGGATCCATAGGAAAGCTGTACAAAGGTAAACTAGAGAATGGATCGTATGTGATGATAAGATCATTGGCTCTGAGAAAGAAATTCTCAATACAAAATCTCAAAGCTAGATTAGATTTACTCTCGAAGCTTCATCATCCAAATTTGGTTAGTCTTTTGGGTCATTGTATTGATGGTAGAGGAAAAGATGGTATTAGTCCCCAGAAACTTCATCTTGTATACGAGTATGTGCAAAATGGCGATTATCGTACACATTTGTCAGAAATTTCACTGGATAAGGCACTAAAATGGTCTGATAGATTAGCAATCTTAATTGGAGTTGCCAAGGCGGTTCATTTTTTACACACTGGTATGAAACCAGGTTGTTCTAGAAACCAATTAAAAACAAACAATATTTTACTTGATGAACATCGCTTTCCCAAGCTAAGTGACTATGGTATGTCCATAATCGCCGAAGAGATCGAAAACATTGAGGTAAACGGAGAAAAACTAAAATATTGCTTAAGGGAAGAATTAGAAGATGATGTTTACAATTTCGGATTCTTATTATTTGAATCACTTGCTGGACCAATTGCAAGTGAGAAAGGAGAAGCATTTTTTCTTAATGAAAGGGCATCATTTGACAGTCACGATGGTAGAATAAGAATTGTAGATCCAGTAGTGTTGACAAGCTGCGGTCAAGAGTCATTATCAATTGTAATATCCATCACAATCAAATGCATTTCTCCACAATCGTCGTCTCGTCCTTCTTTTGAAGATGTCCTGTGGAATTTACAATATGCAGCTCAAGTTCAAGCCTCAGCAGATGCAGAACATTATATATTCTAG | 2319 | 0.3549 | MTYFYFYLHLFLLSLFFSIHTTHQLQFSQTQVLLQLRKYLQYPTSLQIFQNYNAHLCTLTPSQHLSIKCEDNSVTELKIMGDKTNKHGKVSSFNGIAVPNQTLSKTFSIDSFVTTLTRLTSLRVLSLVSLGIWGPLPDKIHRLTLLQVLDLSSNFLFGSIPPKIATFMNLQILTLDGNYFNTTMPDFFEPLSSLSILSFKNNQLKGSFPFSLCKIKNLTHVSFSHNELSGALPNLTVLSRLHVLDLMENRFDSELPLMPKSLVTVLLSKNSFSGEIPIQFGQLSQLQNLDLSSNRLSGVPPSLLFSLTNISYLNLANNVLSGSIPKKLKCGSKLGFVDISGNMLSGLLPSCLESISDRRVVRFGGNCLSVHSQPQDQNQKHGSYCEESSSGKMKFWRWEIDAAIAIILVVFLLLLAFGVFFYRKYHSREIYRHEMLPKIVQDNNNSTTGVSSELLASARYISQKMKLGTQTSTTCRHFSIQELKEITRNFDLSAYIGEGSIGKLYKGKLENGSYVMIRSLALRKKFSIQNLKARLDLLSKLHHPNLVSLLGHCIDGRGKDGISPQKLHLVYEYVQNGDYRTHLSEISLDKALKWSDRLAILIGVAKAVHFLHTGMKPGCSRNQLKTNNILLDEHRFPKLSDYGMSIIAEEIENIEVNGEKLKYCLREELEDDVYNFGFLLFESLAGPIASEKGEAFFLNERASFDSHDGRIRIVDPVVLTSCGQESLSIVISITIKCISPQSSSRPSFEDVLWNLQYAAQVQASADAEHYIF | 772 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g00477 | 772 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 453 | 573 | - | - | |
Vifa5g00477 | 772 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 26 | 260 | - | - | |
Vifa5g00477 | 772 | Pfam | Leucine rich repeat | 284 | 344 | IPR001611 | GO:0005515 | |
Vifa5g00477 | 772 | ProSiteProfiles | Leucine-rich repeat profile. | 285 | 306 | IPR001611 | GO:0005515 | |
Vifa5g00477 | 772 | SUPERFAMILY | L domain-like | 116 | 368 | - | - | |
Vifa5g00477 | 772 | PANTHER | UNNAMED PRODUCT | 114 | 686 | - | - | |
Vifa5g00477 | 772 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 574 | 771 | - | - | |
Vifa5g00477 | 772 | Gene3D | Ribonuclease Inhibitor | 27 | 258 | IPR032675 | - | |
Vifa5g00477 | 772 | Pfam | Protein tyrosine and serine/threonine kinase | 492 | 752 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa5g00477 | 772 | SUPERFAMILY | Protein kinase-like (PK-like) | 469 | 755 | IPR011009 | - | |
Vifa5g00477 | 772 | Gene3D | Phosphorylase Kinase; domain 1 | 451 | 573 | - | - | |
Vifa5g00477 | 772 | ProSiteProfiles | Protein kinase domain profile. | 490 | 772 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g00477 | 772 | Gene3D | Ribonuclease Inhibitor | 259 | 394 | IPR032675 | - | |
Vifa5g00477 | 772 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 262 | 390 | - | - | |
Vifa5g00477 | 772 | Gene3D | Transferase(Phosphotransferase) domain 1 | 574 | 770 | - | - | |
Vifa5g00477 | 772 | SMART | LRR_typ_2 | 143 | 167 | IPR003591 | - | |
Vifa5g00477 | 772 | SMART | LRR_typ_2 | 283 | 306 | IPR003591 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g00477 | Vifa-Chr5 | 110361929 | 110364848 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g00477 | 8 | 700 | Miscellaneous Gene Families | AT5G14210 | 55.492 | 0.0 | 721 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-1 | Vifa5g00477 | PK_Tyr_Ser-Thr | 1.7e-19 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g00477 | - | - | gmx:100813412 | 1065.06 |