Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00448 ATGATTTCCATAAGGTATTCTTCTTCTAGCTTATTTGCAAATTTCGTTTTCACCGATTTGACACTTCTAACAAGTTTTGAGTTCAACAAGCTTAATTTGAATTTTGTAAATCTGCCATTAACTACCACTAAGGTATTTGATCCTGAACTGCACCATTTAAAGCTTATTGTTGTCGGATTTTATAACATTGGGTTCTCAAATTTGTCCCTCCACCTGTTTGTTAAAATGCCTTCATCAGTTTTGCAAAGTCACGAGCGTCTGAGAAAATTCACACGAAACCTTTCTCTGCCCTCTATCGAAACTCTTAGTCTGATCATAATGCATACAGAAAGTGAAGTTGAAGTGGGAAGAGTATTCATGGGAGCAGGATGTAACCATATAGTCAACAACATTTCTTGGGGTGCTTCAGTTGTTCATAATATGGGGAATAATAATTTTTTAAGTGGAGCTGATGAGAAAGTTGCTAGAGTGTTCGAAGCCAAGTTATCAGTTTTGAAAAGATCAAGTAATGCCACTTTGCAGAAGTCTTGTTATTCTGATGCTGATATTGAATTTTCCCTTACGGTTTTCTGGTGTGTGTTACCTTACAAAAAAGTAATTGTTGCTGACTTGCTTCCACCAAGAAATTGGTACACAATAGCAATTGAAATTAAAGTTGTAAGAGCATTTACCAGTCCATCACTACCACCAAAACCTTCATATGTTAAATCACACAATGGAAATTTAAGGTATGGAAGAACAATTCATAAGTTAATTATAGGTAATGGTCTTACTTTGAAGTCTTATATACAAGTTATTCTCATTAATGTGTATGTATATTGTGGGAAAATAGAGGTGGTTGATGTATGCAAATTGTGGTGCAATGGAGTTGGTCGGGTAAATATGCTTTCTGGTTTGGCAAAACTTGGAATGGTTATTGCTTGTGATATTCATTACAAGTCATACCGAGTTTTCCCTGAATATCGTCCAATTTCTAGTTCAACGTTTTTTCCTTCACTGCACTCCAATTCCCACATGAAGGTCCTTGAAATGAGATACAAGGATAATTAA 1050 0.3543 MISIRYSSSSLFANFVFTDLTLLTSFEFNKLNLNFVNLPLTTTKVFDPELHHLKLIVVGFYNIGFSNLSLHLFVKMPSSVLQSHERLRKFTRNLSLPSIETLSLIIMHTESEVEVGRVFMGAGCNHIVNNISWGASVVHNMGNNNFLSGADEKVARVFEAKLSVLKRSSNATLQKSCYSDADIEFSLTVFWCVLPYKKVIVADLLPPRNWYTIAIEIKVVRAFTSPSLPPKPSYVKSHNGNLRYGRTIHKLIIGNGLTLKSYIQVILINVYVYCGKIEVVDVCKLWCNGVGRVNMLSGLAKLGMVIACDIHYKSYRVFPEYRPISSSTFFPSLHSNSHMKVLEMRYKDN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00448 349 PANTHER GATA TRANSCRIPTION FACTOR 307 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00448 Vifa-Chr5 97439383 97441089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00448 237 349 C2C2-Gata Transcription Factor Family AT1G08000 34.513 1.34e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00448 - - nta:107816743 67.3958