Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00447 ATGGGGAATAATCATTTTTTGAGTGGAGCTGATGAGAAAGTTGCTAGAGTGTTCAAAGCCCAGTTATCATTTTTGAAAAGATCAAGTAATGCTACTTTGCAGAAGTTTTGTTATTCTGATGCTGATATTGAATTTTCCCTTACGGTTTTCTGGTGTGTGTTACCTTACAAAAAAGTAATTGTTGCCGACTTGCTTCCACCAAGAAATTGGTACACAATAGCAATTGAAATCAAAGTTGTAAGTGCATTTACTAGTCCATCACTACCACCAAAACCTTCATATTTTAAATCACACAATGGTATGATTAAGTCAATAAGGGTCAAAGTACAAGTGTATGATAGAGTGATTGGTATTAAAGAAGATCGTACTTCAAATGTCATGGCCAAATCTATGAGGTATTTCATGACAAGTCTCTGGTACTTTCGAGATGGTCATTATGGTGATGCCTTAAGACTCTTTGAAGATATAAAGAGCTCTGGTGTGACATCTAATTGTGTTATCCATTGTATTATACTCTCTTCTTATGGTCATGTAGGAAATTTAAGGTATGGAAGAACAATTCATAAGTTAATTATAGGTAATGGTCTTGCTTTGAAGTCTTATATACAAGTTGTTCTCATTAATGTGTATGCATATTGTGGGAAAATGAAGGTGGTTGATGTATGCAAATTGTGGTGCAATGGAGTTGGTCGGGTAAATATGCTTTCTGGTTTGGCAAAACTTGGAATGGTTATTGCTTGTGATGTTCGTTACAAGTCAAATCGAGTTTTCCCTGAATATCGTCCTGCTTCTAGTTCAACGTTTTTTCCTTCACTGCACTCTAATTCCCACATGAAGGTCCTTGAAATGAGATATAAGGATATTGAAAACTCTAGTTTTGAATCACATTCAGTTGCCTCTCCTAAACTCATTTCAAACAATGACAATATTACAACGATAGCTAATAATGATAAAGTCATTGTTGTGTTGATTTAA 975 0.3477 MGNNHFLSGADEKVARVFKAQLSFLKRSSNATLQKFCYSDADIEFSLTVFWCVLPYKKVIVADLLPPRNWYTIAIEIKVVSAFTSPSLPPKPSYFKSHNGMIKSIRVKVQVYDRVIGIKEDRTSNVMAKSMRYFMTSLWYFRDGHYGDALRLFEDIKSSGVTSNCVIHCIILSSYGHVGNLRYGRTIHKLIIGNGLALKSYIQVVLINVYAYCGKMKVVDVCKLWCNGVGRVNMLSGLAKLGMVIACDVRYKSNRVFPEYRPASSSTFFPSLHSNSHMKVLEMRYKDIENSSFESHSVASPKLISNNDNITTIANNDKVIVVLI 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00447 324 PANTHER GATA TRANSCRIPTION FACTOR 246 295 - -
Vifa5g00447 324 Gene3D Tetratricopeptide repeat domain 123 249 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00447 Vifa-Chr5 97435592 97436566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00447 235 307 C2C2-Gata Transcription Factor Family AT3G54810 50.685 2.48e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00447 - - lang:109354556 94.3597