Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00383 ATGGGTGAATTCAAAGAGAAATTAGTAACCCTATACAAGAGCAGATGGTTTGTTTTCGTGGGAGCAATGTGGTTACAATCATGGGCGGGTATAGGGTACTTGTTCGGAAGTATTTCGCCGGTGATTAAGAGTTCGCTTGGTTATAATCAGAAGCAACTTGCTATGTTGGGTGTGGCGAAAGACCTTGGGGATTGTGTTGGCTTTTTGACGGGGATTTTGTGTGAGGTTTTGCCTATTTGGGGAGCGTTGCTTGTTGGGGCGGCTTTGAATCTTTTTGGGTATGGTTGGGTTTGGTTGATTGTTACTGGCCAAGTTCCTACTCTTCCTTTATGGGCTATCTGTATTCTTATATTTATTGGAACAAACGGTGAAACCTACTTCAACACAGTTTCATTGGTGTCTTGTGTGCAAAATTTCCCGAAAAGCCGAGGTCCTGTCGTCGGTATTCTAAAGGGCTTTGCTGGTTTGAGTGGTGCAATATTGACACAGATATATGTACTTATGCATTCCCCTGATCATGCATCATTAATATTTATGGTTGCTGTTGGTCCATCCTTGGTAGCAATTGGTCTTATGTTCATTGTTAGACCGGTCGGAGGTCACAAACAAGTGCGTCCGTCGGATGGAAAATCGTTCACACTTGTCTATGGTGTATGTCTCTTGTTGGCTGCTTATATGATGGGAGTTATGATTGTTCAAGATTTAGTTGATCTGAGTGAAACTGTTATCACAATTTTTACCAGTATCCTCTTTCTGATTCTCCTCTCCCCGATTGTAATTCCTCTGTCGTTGACTTTCGGACCAGTTGAAAAACCTCTAGAGGAAGAAGCACTTCTAGAACCACAAGGACATTCACAACTTGATTCTGATGAAGTAATATTAAGTGAGTTGGAAGATGAGAAGCCTAAGGATATGGACTTGCTCCCTGCATTGGAAAGGCAGAAACGTATAGCGCAATTACAATCGAGACTACTACAAGCAGCTGCAGAAGGAGCTGTTAGGGTTAAGAGGAGGAGAGGACCACATAGAGGAGAAGATTTTACGTTGATGCAAGCTTTGATTAAAGCAGATTTTTGGCTTCTTTTTATTTCCATGGTTTTAGGTTCTGGATCTGGTTTGACCGTAATTGATAATCTCGGCCAGATGAGTCAATCTTTAGGTTATGACAACGCACATATATTTGTCTCCATGATCAGTATTTGGAACTTTCTCGGACGTGTTGGAGGCGGCTACATATCCGAGATTGTTGTCAGGGATCATACATATCCAAGACCAGCTGCATTGGCTGCATTTCAACTAGTTATGACAATTGGTCATCTTTTCATCGGTATGGGATGGCCAGGTTCAATGTACGTCGGCACTTTACTAGTCGGACTTGGTTATGGCGCACATTGGGCAATCGTTCCAGCTACAGCCTCCGAGTTATTTGGTTTGAGAAACTTTGGTGCATTATACAATTTCCTCACACTAGCAAACCCTGTTGGAACACTTGTCTTCTCTAGTCTCATTGCTAGCAGAATCTATGATCATGAAGCAGAAAAACAAGCTCATGGTGGCCTACACTTGAATTTAGGATCAATCGTCTCTCAGGCTGTTAATAGTGGCGGCGAGCAGCTAAAGTGTGAAGGTTACATATGCTTCTTCCTGACTTCATCTATCATGGCAGGATTATGCATTGTTGCAACTGGCTTAAGCATGTTTCTTGTGTTCCGGACAAGGATTGTTTATGCAAGTTTGTATGGAAAATCTTCTATGAGAAACCTTCTATAA 1770 0.422 MGEFKEKLVTLYKSRWFVFVGAMWLQSWAGIGYLFGSISPVIKSSLGYNQKQLAMLGVAKDLGDCVGFLTGILCEVLPIWGALLVGAALNLFGYGWVWLIVTGQVPTLPLWAICILIFIGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYVLMHSPDHASLIFMVAVGPSLVAIGLMFIVRPVGGHKQVRPSDGKSFTLVYGVCLLLAAYMMGVMIVQDLVDLSETVITIFTSILFLILLSPIVIPLSLTFGPVEKPLEEEALLEPQGHSQLDSDEVILSELEDEKPKDMDLLPALERQKRIAQLQSRLLQAAAEGAVRVKRRRGPHRGEDFTLMQALIKADFWLLFISMVLGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMISIWNFLGRVGGGYISEIVVRDHTYPRPAALAAFQLVMTIGHLFIGMGWPGSMYVGTLLVGLGYGAHWAIVPATASELFGLRNFGALYNFLTLANPVGTLVFSSLIASRIYDHEAEKQAHGGLHLNLGSIVSQAVNSGGEQLKCEGYICFFLTSSIMAGLCIVATGLSMFLVFRTRIVYASLYGKSSMRNLL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00383 589 CDD MFS_Mch1p_like 14 562 - -
Vifa5g00383 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 577 - -
Vifa5g00383 589 Gene3D MFS general substrate transporter like domains 312 527 IPR036259 -
Vifa5g00383 589 Pfam Nodulin-like 15 262 IPR010658 -
Vifa5g00383 589 SUPERFAMILY MFS general substrate transporter 6 201 IPR036259 -
Vifa5g00383 589 SUPERFAMILY MFS general substrate transporter 213 572 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00383 Vifa-Chr5 74803883 74808158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00383 5 583 Nodulin-like Gene Family AT5G14120 68.322 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00383 - - aprc:113861924 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g00383 5 74803883 74808158 Vifa5g00383 5 74803883 74808158 ECH