Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00377 ATGGAGAAAATATTGAGGATTGTGTTTATGGTTTTGGCTTTGGTGTTTATGATGTTTTCTAGTGGAGAAGGGCAAATAGTAGAGAATTTCTACATTTCAAGTTGTTCTAATGTAGAACTTTTGGTGTCTCAGGCAGTGACAAACAAGTTTACTCAGACAATTACTACTGGACAAGCAACTCTTCGTCTCTTTTTGCATGATTGCTTTGTTGAGGGATGTGATGCATCAATTATGATAGCTTCACCAAACGGAGATGCAGAAAGAGATGCAAAAGAAAATCTTTCACTACCAGGAGATGGGTTTGACACTATCATTAAAGCAAAGGAAGCAGTTGAAGCTTCTTGCCCAGGAGTTGTTTCATGTGCAGACATTTTAGCACTTGCCACTAGAGACGTTATTGTATTGCTTGGAGGCCCTTCATTCACCGTTGAGCTTGGACGTAGAGACGGACTTATTTCAAAAGAATCAAACGTAGAAGCAAATCTTCCAAAACCAACTTTCAATCTTAATCAATTAAACACAATTTTCTCCAAACACAACCTAACCCAAACCGACATGATTGCACTCTCAGGAGCACACACTATTGGATTCTCACATTGTGACCAATTCACAGATCGTTTATACTCATCTCAAGTGGACCCCACATTAAACCCTAGCTATGCACAAGAATTAATGACAGGGTGCCCTAGAAATGTTGACCCATTAATTGTGCTTCCTCTTGATCCTCAAACTCAATTTGTTTTTGATAATATTTACTACCAAAACTTGGTTAATGGAAAAGGGTTATTAACTTCTGATCAAGTTTTGTTCACTGATGATGCTTCAAAGTCTACGGTTGTTGAGTTTGCTAATAATGGGGCAAAATTCTTTGATGCATTTGTTGTTGCTATAAAGAAGCTTGGAAGGGTTGGGGTAAAGACGGGTAAAGATGGAGAGATTAGGAGAGATTGTTCTAAATTTAATTAG 966 0.3799 MEKILRIVFMVLALVFMMFSSGEGQIVENFYISSCSNVELLVSQAVTNKFTQTITTGQATLRLFLHDCFVEGCDASIMIASPNGDAERDAKENLSLPGDGFDTIIKAKEAVEASCPGVVSCADILALATRDVIVLLGGPSFTVELGRRDGLISKESNVEANLPKPTFNLNQLNTIFSKHNLTQTDMIALSGAHTIGFSHCDQFTDRLYSSQVDPTLNPSYAQELMTGCPRNVDPLIVLPLDPQTQFVFDNIYYQNLVNGKGLLTSDQVLFTDDASKSTVVEFANNGAKFFDAFVVAIKKLGRVGVKTGKDGEIRRDCSKFN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00377 321 Gene3D - 29 321 - -
Vifa5g00377 321 FunFam Peroxidase 29 175 - -
Vifa5g00377 321 SUPERFAMILY Heme-dependent peroxidases 28 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 Gene3D Peroxidase, domain 2 163 300 - -
Vifa5g00377 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Vifa5g00377 321 Pfam Peroxidase 43 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 ProSiteProfiles Plant heme peroxidase family profile. 25 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PANTHER - 7 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g00377 321 CDD secretory_peroxidase 29 320 IPR033905 GO:0004601|GO:0042744
Vifa5g00377 321 FunFam Peroxidase 163 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00377 Vifa-Chr5 72119012 72121773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00377 7 321 Peroxidase AT5G14130 58.934 2.60e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00377 K00430 - gmx:100791275 502.671