Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00353 ATGAATGTAAAGAAATGTCACTTCTCAGCTAGTAAGAAAGATGTTTGGAATCTTTACTACTTCTACTATGCCAAAAAAGGTATAGTGACTAAAGCATTGAAGATTCTTTTGTCTAAAGTGTTTCAAGAGTTTCATGGTTTGGTAAGGTTAGAGGCTTATACTCTTTTGGATAATAAGGCTTCTCAAAGAGTGTTGGAAAAAGTTGGGTTCCAAAGAGAAAGATTGCTTAGAATTTTTTTTTACCTTAAAGGTCAAGAAACACATACTATGGCTATGGATTTTAAACCTTACCATAATTCTGAGGGAGCTCATGGTAATGGTAACACCTGCTTCATCAAACACGACTACCTTCCTGCTTATCATTACAAGATTCAGAAGCCTTCGATTAACAATATTGCGGCTTCTCAACCCTCTGAAGATTCCATGGAGTCTACTCAAGAATCTCAAACCTCTCTTGCTACCATTTAA 468 0.359 MNVKKCHFSASKKDVWNLYYFYYAKKGIVTKALKILLSKVFQEFHGLVRLEAYTLLDNKASQRVLEKVGFQRERLLRIFFYLKGQETHTMAMDFKPYHNSEGAHGNGNTCFIKHDYLPAYHYKIQKPSINNIAASQPSEDSMESTQESQTSLATI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00353 155 Gene3D - 6 95 - -
Vifa5g00353 155 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 23 92 IPR016181 -
Vifa5g00353 155 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 23 92 - -
Vifa5g00353 155 Pfam Acetyltransferase (GNAT) domain 24 71 IPR000182 GO:0016747
Vifa5g00353 155 MobiDBLite consensus disorder prediction 134 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00353 Vifa-Chr5 63542789 63544926 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa5g00353 Acetyltransf_3 7.7e-08 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00353 - - tpra:123891489 86.6557