Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00217 ATGTCTTCCTTTCTACGCATTTTCTTTATCATTTTCTTGGCTACTGCTACTTCTGTTCAATCCGCAAGACAATTTCATGTTGGTGATCATGTAGGTTGGCGTCAACCTGATCAAAACAATGCTGATTTTTACACCAAATGGGCTCAAACTAACCGATTCCAAATCGGAGATTCTCTCGTTTTTGAGTACGAGAATGACTCAGTCCTAAGTGTTGAAAAAGAGGATTACTTTAACTGTGACACAAGTGAACCAATCACTACTTTTACGAATGGAAAGAGCACTCTTAATCTCGACAGATCCGGACCTTTCTACTTTATCAGTGGAACTGATGATCATTGCAACAATGGCCAAAAACTGCTTGTTGAAGTTATGGCGCCGCATCCAATTCCAGCCTCTCCTCCCACTCCCACCACCATTGCAGTTCCGCCTGAAGGCTTCTCGTCACCGATGATGGCTCCTTCGAATGCGCCTTATTCATCTGATACCTTGGATCAGGCTGCATCATCTTCCACCATGGTGGTGGTTACTTCAAGTTTTATGTCTACTTTGGTCACATTTGTTATTGTGATGATGTTAGGACTTTAA 585 0.4239 MSSFLRIFFIIFLATATSVQSARQFHVGDHVGWRQPDQNNADFYTKWAQTNRFQIGDSLVFEYENDSVLSVEKEDYFNCDTSEPITTFTNGKSTLNLDRSGPFYFISGTDDHCNNGQKLLVEVMAPHPIPASPPTPTTIAVPPEGFSSPMMAPSNAPYSSDTLDQAASSSTMVVVTSSFMSTLVTFVIVMMLGL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00217 194 Gene3D - 22 131 IPR008972 -
Vifa5g00217 194 SUPERFAMILY Cupredoxins 22 124 IPR008972 -
Vifa5g00217 194 FunFam Early nodulin-like protein 1 22 128 - -
Vifa5g00217 194 Pfam Plastocyanin-like domain 38 117 IPR003245 GO:0009055
Vifa5g00217 194 CDD OsENODL1_like 23 124 IPR041846 -
Vifa5g00217 194 ProSiteProfiles Phytocyanin domain profile. 23 125 IPR003245 GO:0009055
Vifa5g00217 194 PANTHER BLUE COPPER PROTEIN 22 164 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00217 Vifa-Chr5 29415491 29416172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00217 5 127 Phytocyanin Superfamily AT1G79800 48.780 6.29e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00217 - - adu:107461559 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g00217 5 29415491 29416172 Vifa5g00217 5 29415491 29416172 ECH