Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00194 ATGATCTTTAATTCAAAACGGATTCAAATACGTTACGATCTCCAAACTTCTTTCATTTCATCTTCCTTTCTTTGTCTCTTTCTCTCTCTATCGTTTTGCTTGTTTCTTCCTCATCATCTTCCTTCTTCCTTCATCTTCAATTCTTACCCAAGCATCTTCTATTCTTCTCCCATTCTCACCATTTTCAACTGTCATCTACTCTCTTCTAAATCGTCTTCCTCGCCTCTCCTCCTCGCTGCCGGCGATCGTCAAGATCGCATTGCGCTTTTTGATTTCCATTTAAAAGTCGGATTTAGGAAAGTTGTACCTGACTATTGGGAATTTGCGAATGAGGGTTTCCGACGAGGTGAGAAGAATCTACTCCGTAATATACAGCGGCAAAAAATATTGTCGGAGGCAGGAACACCGATTGTGACTATGACAGTAGCCATAACGACTAATGTTGTGACAGTAGTGATGGTGGCACCGGTTAGGATGGTGTCTTCAACGAATTCCGGTGATAACTTAATAGAAGGAGTGCATAAAACGATGGACATGCTTCAGGCAAAGGGAAAAAGATTGGTTTTTGTCACCAACAACTTAACTAAGTCTTGGAAACAATATGGAAAGAAGTTTGAAACACTTGGCCTGAATGTCAATGAGGAGGAGATTTTTGCATCGTCTTTTGAAGTTCCCACGTATTTGAAATCCATTGATTTCCCAAAAGATTAA 711 0.4023 MIFNSKRIQIRYDLQTSFISSSFLCLFLSLSFCLFLPHHLPSSFIFNSYPSIFYSSPILTIFNCHLLSSKSSSSPLLLAAGDRQDRIALFDFHLKVGFRKVVPDYWEFANEGFRRGEKNLLRNIQRQKILSEAGTPIVTMTVAITTNVVTVVMVAPVRMVSSTNSGDNLIEGVHKTMDMLQAKGKRLVFVTNNLTKSWKQYGKKFETLGLNVNEEEIFASSFEVPTYLKSIDFPKD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00194 236 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 97 160 IPR027725 -
Vifa5g00194 236 Pfam Haloacid dehalogenase-like hydrolase 165 233 IPR006357 -
Vifa5g00194 236 Gene3D - 160 236 IPR023214 -
Vifa5g00194 236 SUPERFAMILY HAD-like 166 234 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00194 Vifa-Chr5 26621186 26622414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00194 97 168 HSF AT5G62020 47.222 3.30e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00194 K19269 - pvy:116107187 117.087