Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g00169 | ATGCCTAAGAAGCTTCAGAAAACCCTTCAAGATTACCTCAACAAACTCAAAAACAAAAACCCTCACCCTCAAATCAAGTTAACCAAAATGCTCTCTGGCTGCAAACACCCCAAAACGCCGTCGTTTTCTTTAGAAAACGGCAGAAACTTATCATCTAACGCCGTTAACGACGCTGCAACGCTAGCTGACGTTGACCGTTTTCTCTTCGAGAATTTCAAGTCTCTGTATTTCAAAGACGACGACGAAACCGAAAACTCCGTCAAAAAAATCTCCGACGGAAAAAACAACCGCGAACCACCGAAATTGACTTCCTCCTTGCTTGAATCACCGCGATTCGATCGATCACCACCGCAGAATCTCTCCGGATCAGCGCGATTCTTCGTGAAACCGGGAAACTCAGGATCGTTGATGGAAGATGCTTTATCGCTAACAAACAGCGATGAAGGCGACTCGAGTAATTCCAATTCCTCATCGACAGAATCGCCTTCGAAAGAGGTAGTTATAGTGAATCATGATGATCATAATCAATCTCTTCCTGAAAACTGTATTGCTCTGTTATCGTATTCGCCGAGTCCTTACGACGAATTCAGGCGATCGATGCAGGAATTGGTGGAATCCAAGTACGGTAAAACTGAACTCAATCAAATGAAAATCGATTGGGATTTCATGGAGGAGATGCTGTTTTGTTACCTGAATCTGAATGAGAAAAAGTCTCATAAGTTTATTTTAAGTGCTTTTGTTGATCTCATCACTGTTATGCGTCAGAATTCGGAAGCAGCTCCGGCGAAGCCGTGTAGCGTCAGAACCGTTAGGATTGGTAGGGAAGTCAGGAAGAAGAAGACTAAGCAAGTTACCATTGAATTTGGGTCTTAG | 873 | 0.4341 | MPKKLQKTLQDYLNKLKNKNPHPQIKLTKMLSGCKHPKTPSFSLENGRNLSSNAVNDAATLADVDRFLFENFKSLYFKDDDETENSVKKISDGKNNREPPKLTSSLLESPRFDRSPPQNLSGSARFFVKPGNSGSLMEDALSLTNSDEGDSSNSNSSSTESPSKEVVIVNHDDHNQSLPENCIALLSYSPSPYDEFRRSMQELVESKYGKTELNQMKIDWDFMEEMLFCYLNLNEKKSHKFILSAFVDLITVMRQNSEAAPAKPCSVRTVRIGREVRKKKTKQVTIEFGS | 290 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g00169 | 290 | MobiDBLite | consensus disorder prediction | 83 | 163 | - | - | |
Vifa5g00169 | 290 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 183 | 252 | IPR006458 | - | |
Vifa5g00169 | 290 | MobiDBLite | consensus disorder prediction | 97 | 128 | - | - | |
Vifa5g00169 | 290 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 60 | 253 | IPR038933 | GO:0045892 | |
Vifa5g00169 | 290 | ProSiteProfiles | OVATE domain profile. | 185 | 252 | IPR006458 | - | |
Vifa5g00169 | 290 | MobiDBLite | consensus disorder prediction | 137 | 163 | - | - | |
Vifa5g00169 | 290 | Pfam | Transcriptional repressor, ovate | 189 | 251 | IPR006458 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g00169 | Vifa-Chr5 | 22866001 | 22866873 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Vifa5g00169 | Ovate | 1.7e-20 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g00169 | - | - | lja:Lj3g3v0160750.1 | 296.975 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa5g00169 | 5 | 22866001 | 22866873 | Vifa5g00169 | 5 | 22866001 | 22866873 | ECH | |
Vifa5g00169 | 5 | 22866001 | 22866873 | Vifa2g05472 | 2 | 1629154314 | 1629155180 | PCT |