Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g00167 | ATGAGTGTGGTCGGTTTTGATTTCGGTAACGAGAGCTGCATTGTTGCTGTTGCAAGGCAAAGAGGGATTGATGTTGTGCTTAACGATGAGTCCAAGCGTGAGACTCCTGCTATTGTGTGTTTTGGCGATAAACAGCGGTTTATTGGGACGGCTGGGGCTGCTACCACTATGATGAACCCGAAAAATTCTATCTCGCAGATGAAGAGGTTGATTGGTAAGAAGTTTGCTGATCCGGAAGTGCAGAGTGATTTGAAGTCGTTGCCTTTTGCTGTTACTGAAGGACCTGATGGGTATCCGTTGATTCATGTGCGGTATCTGGGTGAACCTAGAGCGTATACGGCTACTCAAGTCTTTGCGATGATGTTGTCGAATCTTAAAGAGATAGCACAGAAAAACCTGAATGCGGCTGTTGTTGATTGCTGCATTGGGATTCCGATTTATTTTACTGATCTTCAGAGGAGAGCTGTCTTGGATGCAGCTACTATTGCTGGTTTGCATCCGCTTCATTTGATTCATGAAACAACGGCAACTGCTTTGGCTTATGGAATTTATAAGACTGATCTTCCTGAGAATGATCAGCTGAATGTTGCTTTTGTTGATGTTGGTCATGCTAGTATGCAAGTTTGTATTGCTGGATTTAAAAAGGGGCAGTTGAAAGTGTTGTCTCATTCGTACGATAGGTCCCTGGGTGGTAGAGATTTTGATGAGGCTTTGTTCCATCATTTTGCTGCTAAGTTTAAGGAGGAGTACAAGATTGATGTTTATCAGAATGCCAGGGCTTCTCTGAGGTTGAGGACTGCATGTGAGAAGCTGAAGAAAGTTCTCAGTGCAAATCCTGAGGCACCTCTGAACATCGAATGCTTAATGGAAGAGAAGGATGTTAGGGGATATATCAAGCGTGATGACTTTGAGCAGCTATCTCTTCCAATATTGGAACGTGTGAAGGGGCCTTTGGAGAAGGCACTAGCAGAAGCTGGTCTTACAGTTGATAACATCCACATGGTTGAGGTAGTTGGTTCTGGTTCTCGTGTACCAGCAATTAACAAAATATTGACTGAGTTTTTCAAAAAGGAACCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCCAGGGGTGCTGCATTGCAGTGTGCTATTCTCAGTCCAACTTTTAAAGTCCGAGAGTTCCAGGTCAACGAAAGCTTTCCTTTCTCAATTTCTCTGTCATGGAAAGGTTCTGGTTCAGATGCACATGACAGTGCACCAGACAATAAACAAAGTACCCTTGTTTTTCCCAAAGGAAATTCCATTCCAAGTGTCAAGGTACTGACATTCTTCAGAACAGAAACCTTTTCTGTTGATGTACAATGTCATGATCAGAGCGATTTACAAACACCTACAAAGATCAGCACATATACTATTGGCCCTTTCAAAACTGAAAACGGTGAAAAGGCAAAGATTAAAGTGAAAGTTCGTTTGAGTCTTCATGGAATTGTAACTGTTGATTCGGCAACTCTCTTCGAAGAGGAAGAAATTGAAGTTCCAGTTACCAAAGAATCAGCAGAAGAAAATGCCAAGATGGAAACTGATGAAGCTCCCACTGATGCTGCTGCACCACCACCTACTAGCTCCAATGATAGCGATGTTAATATGCAAGATGCTAAGGCTGCTGCTGATACCAATGGAGCTGTGAATGGTGTGCCTGAGTCAGGAGACAAGCCTGTGCAAATGGATACTGATGCCAAGGTTGAGGCTCCAAAGAAAAAAGTGAAGAAAACAAACATTCCTATTACAGAGGTAGTCTATGGTGCAATGTCAACTGTGGATGTTCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAGGATCGAGTGATGGAGGATACAAAGGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGATAGATACCACGAGTTTGTCCAAGCTTCAGAAAGCAATGAATTTCTTGCCAAACTTCAGGAGGTGGAGGATTGGCTATATGAGGATGGTGAAGATGAGACCAAAGGTGTATACGTTGCTAAGCTAGAAGAACTCAAAAAGCAAGGGGATCCAATCGAGGAGCGCTACAAAGAACACACAGACAGAGATGCAGTAATTGACCAGCTTGTCTATTGTATCAATAGTTACAGAGAAGTTGCAATGTCTAATGATCCCAAATTTGATCACATTGACATCAATGAGAAACAGAAGGTCTTGAATGAATGTGGAGAAGCTGAGAACTGGCTTAGAGAGAAGAAGCAACAACAGAGTTTGCTTCCAAAATATGCTACCCCCGTCCTCTTGTCAGCTGATATAAGAAAAAAAGCTGAGGCTGTTGATAGGTCCTGCAAGCCGATTATGACAAAACCAAAACCGGCGAAGCCTGCTTCTCCAGCTACTCCAGAAACACCGGCAACCCCACCTCCTCAGGACGGCGAGCAGGAGCAGCAGCAGCAACCAGAACAGCAACCTCAAGAGGATGCTAATGCCAGTTCCAATGGGAATGCAGAGCAAAATGGTAATCAAGTCCCACCAGCCTCTGGTGAACCAATGGAGACTGACAAACCGGAGAACACCGGCTCAGCCTAA | 2595 | 0.437 | MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAATTMMNPKNSISQMKRLIGKKFADPEVQSDLKSLPFAVTEGPDGYPLIHVRYLGEPRAYTATQVFAMMLSNLKEIAQKNLNAAVVDCCIGIPIYFTDLQRRAVLDAATIAGLHPLHLIHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLSHSYDRSLGGRDFDEALFHHFAAKFKEEYKIDVYQNARASLRLRTACEKLKKVLSANPEAPLNIECLMEEKDVRGYIKRDDFEQLSLPILERVKGPLEKALAEAGLTVDNIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGAALQCAILSPTFKVREFQVNESFPFSISLSWKGSGSDAHDSAPDNKQSTLVFPKGNSIPSVKVLTFFRTETFSVDVQCHDQSDLQTPTKISTYTIGPFKTENGEKAKIKVKVRLSLHGIVTVDSATLFEEEEIEVPVTKESAEENAKMETDEAPTDAAAPPPTSSNDSDVNMQDAKAAADTNGAVNGVPESGDKPVQMDTDAKVEAPKKKVKKTNIPITEVVYGAMSTVDVQKAVEKEFEMALQDRVMEDTKDKKNAVEAYVYDMRNKLNDRYHEFVQASESNEFLAKLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEHTDRDAVIDQLVYCINSYREVAMSNDPKFDHIDINEKQKVLNECGEAENWLREKKQQQSLLPKYATPVLLSADIRKKAEAVDRSCKPIMTKPKPAKPASPATPETPATPPPQDGEQEQQQQPEQQPQEDANASSNGNAEQNGNQVPPASGEPMETDKPENTGSA | 864 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g00167 | 864 | MobiDBLite | consensus disorder prediction | 811 | 848 | - | - | |
Vifa5g00167 | 864 | Pfam | Hsp70 protein | 3 | 699 | IPR013126 | GO:0005524|GO:0140662 | |
Vifa5g00167 | 864 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 709 | 798 | IPR029048 | - | |
Vifa5g00167 | 864 | Gene3D | - | 38 | 113 | - | - | |
Vifa5g00167 | 864 | FunFam | Heat shock 70 kDa protein 4 | 111 | 205 | - | - | |
Vifa5g00167 | 864 | SUPERFAMILY | Actin-like ATPase domain | 195 | 380 | IPR043129 | - | |
Vifa5g00167 | 864 | Gene3D | - | 5 | 374 | - | - | |
Vifa5g00167 | 864 | FunFam | Heat shock 70 kDa protein 14 | 387 | 596 | - | - | |
Vifa5g00167 | 864 | PANTHER | HSC70CB, ISOFORM G-RELATED | 1 | 832 | - | - | |
Vifa5g00167 | 864 | FunFam | Heat shock 70 kDa protein 4 | 1 | 85 | - | - | |
Vifa5g00167 | 864 | MobiDBLite | consensus disorder prediction | 779 | 864 | - | - | |
Vifa5g00167 | 864 | FunFam | Heat shock 70 kDa protein 4 | 230 | 313 | - | - | |
Vifa5g00167 | 864 | CDD | HSPA4_like_NDB | 2 | 381 | - | - | |
Vifa5g00167 | 864 | Gene3D | Actin; Chain A, domain 4 | 230 | 313 | - | - | |
Vifa5g00167 | 864 | FunFam | Heat shock 70 kDa protein 4 | 38 | 113 | - | - | |
Vifa5g00167 | 864 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 600 | 698 | IPR029048 | - | |
Vifa5g00167 | 864 | FunFam | Heat shock 70 kDa protein 4 | 598 | 708 | - | - | |
Vifa5g00167 | 864 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 385 | 525 | IPR029047 | - | |
Vifa5g00167 | 864 | PRINTS | 70kDa heat shock protein signature | 332 | 348 | - | - | |
Vifa5g00167 | 864 | PRINTS | 70kDa heat shock protein signature | 363 | 383 | - | - | |
Vifa5g00167 | 864 | PRINTS | 70kDa heat shock protein signature | 30 | 42 | - | - | |
Vifa5g00167 | 864 | PRINTS | 70kDa heat shock protein signature | 140 | 160 | - | - | |
Vifa5g00167 | 864 | PRINTS | 70kDa heat shock protein signature | 2 | 15 | - | - | |
Vifa5g00167 | 864 | MobiDBLite | consensus disorder prediction | 507 | 523 | - | - | |
Vifa5g00167 | 864 | SUPERFAMILY | Actin-like ATPase domain | 1 | 185 | IPR043129 | - | |
Vifa5g00167 | 864 | Gene3D | - | 598 | 708 | IPR029048 | - | |
Vifa5g00167 | 864 | Gene3D | - | 186 | 360 | - | - | |
Vifa5g00167 | 864 | MobiDBLite | consensus disorder prediction | 507 | 578 | - | - | |
Vifa5g00167 | 864 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 384 | 631 | IPR029047 | - | |
Vifa5g00167 | 864 | MobiDBLite | consensus disorder prediction | 793 | 810 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g00167 | Vifa-Chr5 | 22174820 | 22178550 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g00167 | 4 | 697 | Calmodulin-binding Proteins | AT3G12580 | 29.471 | 1.78e-86 | 287 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g00167 | K09489 | - | gmx:100778196 | 1377.07 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa5g00167 | 5 | 22174820 | 22178550 | Vifa5g00167 | 5 | 22174820 | 22178550 | ECH | |
Vifa5g00167 | 5 | 22174820 | 22178550 | Vifa2g02224 | 2 | 576299282 | 576307007 | PCT |