Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00113 ATGGCGAAGTTGGTTCTGAAAGCTGGAAGCAGGCCTCCGTGGGTGGGACTAGCAGCTGCAGTTTGGATTCAAATAGCTGCTGGTAATGCATACAACTTCCCTCTCTACTCATCTGCTCTGAAATCTGTGTTGGGTCTAAATCAACAACAAGTGACTATTCTTGGAGTGGCAAATGATGTTGGAGAGAATTTGAGTTTGTTTCCTGGTATTGCCTGCAACAAGTTCCCTCCTTGGGCTTTGCTTCTTGTTGGTTCTGTCCTTTGTTTCTTTGGTTATGGTCTTATCTGGCTTGCTGTTACCCAAACTGTTTCCAACTTGCCCTATCTTCTGTTATGGCTTGCGCTTTGTGTTGCCACCAACAGCAACGCATGGTTTGGGACAGCTGTGCTTGTAACCAACATGAGAAACTTTCCTCTCAGTAGAGGCACAATCTCTGGCATTCTCAAAGGTTATGTAGGGATTAGTGCGTCAGTATATACATTAATATATAGCATTTTGCTAAATGGTTCTGCTTCTAAATTACTCTTGTTTCTAGCTATTGGAGTTTCTACTGTGTGTTTAGTTTTGATGTACTTCATTAGGCCGTGTACTCCTCCTTCTGGTGAAGACTCTTCTGTTCATGTTCATTTTATTTTTACACAAGCTTCAAGTATTTTACTTGCTACATATCTAGTTATAACTACAATACTAAGCGACACCGTTTCATTTATTGATTCTGTTTCCTACATCTTAGTTTCCATAATGATTATACTTATGATAACTCCTCTTGCAATTCCTTTGAAAATGACTCTATTTCCTGCAACACCAAAAAGCAATGTTCTTATGGTTGATTCTCCTGATGTTTCAACACAAACAAATCCGTTGATTGCGCCTTCATCCACTTCGGTTGCATATGTTGGAAGTTTTCATGAAAATGAGGATGCTTCTTCGGATGTTGAGATACTAATTGCAGAAGGGGAAGGGGCAGTGAGGAAGAAAAGGAGACCGAAAAGAGGAGATGATTTTAAGTTCAAAGAAGCTATACTCAAGGCTGATTTCTGGCTACTTTGGTTTGCTTATTCTTTAGGCGTTGGCTCGGGAATAACTGTTCTCAATAATTTGGCTCAAATTGGAATTTCTTTGGGTCTAGAAGATACCACCACATTGCTTTCGGTCTTCAGTTTTTGCAATTTTATTGGTCGTCTCGGTGCTGGTGCTGTCTCTGAACACTTTGTTAGGTTGAAAACACTGCCTAGAACATTTTGGATGTCAATTACACAAGTCATTATGATCATAGGATTTTTGCTTTATGCTTCAGCTCTAGATGGAACTCTTTATGCTGCAACCGCTTTACTTGGAATGTGCTATGGAGTTCAGTATTCTATAATGGTTGCAACAGTTTCTGAGCTATTTGGTTTGAAGCATTTTGGTGTAATTAGCAGTTTCATGATGCTAGGAAATCCAATTGGTGCACTTCTTTTTTCTGTTTTCCTTGCGGCAAATTTGTATGATACAGAAGCTTCAAAACAAGGAAACTCTACTTGCTATGGTGCAAATTGCTTCCGAATCACTTTTCTGGTTTTGGCTTGTGTATGTGGAATTGGTACCATTTTGAGTATAATTTTGACAGTTAGAGTAAGACCGGTATATCAAATGCTGTACGCAAGCGGTTCGTTTCGTCTATCCCGTACTTCAAATCAATGA 1683 0.3957 MAKLVLKAGSRPPWVGLAAAVWIQIAAGNAYNFPLYSSALKSVLGLNQQQVTILGVANDVGENLSLFPGIACNKFPPWALLLVGSVLCFFGYGLIWLAVTQTVSNLPYLLLWLALCVATNSNAWFGTAVLVTNMRNFPLSRGTISGILKGYVGISASVYTLIYSILLNGSASKLLLFLAIGVSTVCLVLMYFIRPCTPPSGEDSSVHVHFIFTQASSILLATYLVITTILSDTVSFIDSVSYILVSIMIILMITPLAIPLKMTLFPATPKSNVLMVDSPDVSTQTNPLIAPSSTSVAYVGSFHENEDASSDVEILIAEGEGAVRKKRRPKRGDDFKFKEAILKADFWLLWFAYSLGVGSGITVLNNLAQIGISLGLEDTTTLLSVFSFCNFIGRLGAGAVSEHFVRLKTLPRTFWMSITQVIMIIGFLLYASALDGTLYAATALLGMCYGVQYSIMVATVSELFGLKHFGVISSFMMLGNPIGALLFSVFLAANLYDTEASKQGNSTCYGANCFRITFLVLACVCGIGTILSIILTVRVRPVYQMLYASGSFRLSRTSNQ 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00113 560 Gene3D MFS general substrate transporter like domains 344 544 IPR036259 -
Vifa5g00113 560 Gene3D MFS general substrate transporter like domains 14 202 IPR036259 -
Vifa5g00113 560 SUPERFAMILY MFS general substrate transporter 10 198 IPR036259 -
Vifa5g00113 560 SUPERFAMILY MFS general substrate transporter 327 540 IPR036259 -
Vifa5g00113 560 CDD MFS_Mch1p_like 12 529 - -
Vifa5g00113 560 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 544 - -
Vifa5g00113 560 Pfam Nodulin-like 13 260 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00113 Vifa-Chr5 14165219 14167078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00113 1 559 Nodulin-like Gene Family AT1G80530 59.075 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00113 - - psat:127087605 998.423