Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00112 ATGGCGAAGTTGGTTCTGAAAGCTGGAAGCAGGCCTCCGTGGGTGGGACTAGCAGCTGCAGTTTGGATTCAAATAGCTGCTGGTAATGCATACAACTTCCCTCTCTACTCATCTGCTCTGAAATCTGTGTTGGGTCTAAATCAACAACAAGTGACTATTCTTGGAGTGGCAAATGATGTTGGAGAGAATTTGAGTTTGTTTCCTGGTATTGCCTGCAACAAGTTCCCTCCTTGGGCTTTGCTTCTTGTTGGTTCTGTCCTTTGTTTCTTTGGTTATGGTCTTATCTGGCTTGCTGTTACCCAAACTGTTTCCAACTTGCCCTATCTTCTGTTATGGCTTGCGCTTTGTGTTGCCACCAACAGCAACGCATGGTTTGGGACAGCTGTGCTTGTAACCAACATGAGAAACTTTCCTCTCAGTAGAGGCACAATCTCTGGCATTCTCAAAGCTATTGGAGTTTCTACTGTGTGTTTAGTTTTGATGTACTTCATTAGGCCGTGTACTCCTCCTTCTGGTGAAGACTCTTCTGTTCATGTTCATTTTATTTTTACACAAGCTTCAAGTATTTTACTTGCTACATATCTAGTTATAACTACAATACTAAGCGACACCGTTTCATTTATTGATTCTGTTTCCTACATCTTAGTTTCCATAATGATTATACTTATGATAACTCCTCTTGCAATTCCTTTGAAAATGACTCTATTTCCTGCAACACCAAAAAGCAATGTTCTTATGGTTGATTCTCCTGATGTTTCAACACAAACAAATCCGTTGATTGCGCCTTCATCCACTTCGGTTGCATATGTTGGAAGTTTTCATGAAAATGAGGATGCTTCTTCGGATGTTGAGATACTAATTGCAGAAGGGGAAGGGGCAGTGAGGAAGAAAAGGAGACCGAAAAGAGGAGATGATTTTAAGTTCAAAGAAGCTATACTCAAGGCTGATTTCTGGCTACTTTGGTTTGCTTATTCTTTAGGCGTTGGCTCGGGAATAACTGTTCTCAATAATTTGGCTCAAATTGGAATTTCTTTGGGTCTAGAAGATACCACCACATTGCTTTCGGTCTTCAGTTTTTGCAATTTTATTGGTCGTCTCGGTGCTGGTGCTGTCTCTGAACACTTTGTTAGGTTGAAAACACTGCCTAGAACATTTTGGATGTCAATTACACAAGTCATTATGATCATAGGATTTTTGCTTTATGCTTCAGCTCTAGATGGAACTCTTTATGCTGCAACCGCTTTACTTGGAATGTGCTATGGAGTTCAGTATTCTATAATGGTTGCAACAGTTTCTGAGCTATTTGGTTTGAAGCATTTTGGTGTAATTAGCAGTTTCATGATGCTAGGAAATCCAATTGGTGCACTTCTTTTTTCTGTTTTCCTTGCGGCAAATTTGTATGATACAGAAGCTTCAAAACAAGGAAACTCTACTTGCTATGGTGCAAATTGCTTCCGAATCACTTTTCTGGTTTTGGCTTGTGTATGTGGAATTGGTACCATTTTGAGTATAATTTTGACAGTTAGAGTAAGACCGGTATATCAAATGCTGTACGCAAGCGGTTCGTTTCGTCTATCCCGTACTTCAAATCAATGA 1596 0.4004 MAKLVLKAGSRPPWVGLAAAVWIQIAAGNAYNFPLYSSALKSVLGLNQQQVTILGVANDVGENLSLFPGIACNKFPPWALLLVGSVLCFFGYGLIWLAVTQTVSNLPYLLLWLALCVATNSNAWFGTAVLVTNMRNFPLSRGTISGILKAIGVSTVCLVLMYFIRPCTPPSGEDSSVHVHFIFTQASSILLATYLVITTILSDTVSFIDSVSYILVSIMIILMITPLAIPLKMTLFPATPKSNVLMVDSPDVSTQTNPLIAPSSTSVAYVGSFHENEDASSDVEILIAEGEGAVRKKRRPKRGDDFKFKEAILKADFWLLWFAYSLGVGSGITVLNNLAQIGISLGLEDTTTLLSVFSFCNFIGRLGAGAVSEHFVRLKTLPRTFWMSITQVIMIIGFLLYASALDGTLYAATALLGMCYGVQYSIMVATVSELFGLKHFGVISSFMMLGNPIGALLFSVFLAANLYDTEASKQGNSTCYGANCFRITFLVLACVCGIGTILSIILTVRVRPVYQMLYASGSFRLSRTSNQ 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00112 531 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 515 - -
Vifa5g00112 531 SUPERFAMILY MFS general substrate transporter 10 166 IPR036259 -
Vifa5g00112 531 SUPERFAMILY MFS general substrate transporter 298 511 IPR036259 -
Vifa5g00112 531 CDD MFS_Mch1p_like 12 500 - -
Vifa5g00112 531 Gene3D MFS general substrate transporter like domains 315 515 IPR036259 -
Vifa5g00112 531 Pfam Nodulin-like 13 154 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00112 Vifa-Chr5 14165219 14167078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00112 1 530 Nodulin-like Gene Family AT1G80530 56.406 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00112 - - psat:127087605 933.324