Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g00086 | ATGGATTATTCACCATGGATTAACACTTCCTTAGATCTCAACATTAACCCTCAAAGGTCTCATCAAGAAGCTCTTAAAAATGGAATGGAAAACAATTTTTTCTCATTAGGGTTGAGGAACTCCTCTCCAAAAGAAGAGTCAAGTGATGCTTTGGTGGAAGAGCTGAAACGAGTGAGTGCAGAAAACAAGAAGTTAACAGGAATGTTGACAGAGATGTGTGAGAATTACAACACATTGAGAAACAACATGATGGAATATATGAAGAAGAATCCTGAAACTAAAGAGGTTATAAGTTTTTCAAAGAAAAGAAAATCTGATGAAATAAGCAGTAGTAACAACAATCTAATCGGAGTTAATGGAAGCAACTCCGAAAGTAGTTCAAGTGATGAAGATCAATCCTGCAAGAAACCAAGAGAATTAGAAACTTGCATTAAGGCTAAAGTTTCAAGAGTTTATTTCAAGACAGAAGCATCTGATTCAAGCCTTATTGTGAAAGATGGATATCAATGGAGAAAATATGGACAAAAGGTGACAAGAGATAACCCTTCACCAAGAGCGTATTTCAAATGTTCTTTCGCTCCGAGCTGCACAGTGAAGAAAAAAGTGCAAAGAAGTGTGGATGATCCATCAGTTACAGTTGCAACATATGAAGGAGAACACAATCATCCTCATCCTTCTCAAATGGAGCCAACAAACAACCGTGGTAGGAATCAGATGAATTCGGCAGCACCTTCTTCTGCTGCTGCACCAAGTACAGTTACACTTGATTGGACAAAAAAACCTAAGTGTAGAAATGATTCTTCTTCTAAGAATATGATGATAAATAGTAATTCCAAAATGGAAATACCTCAGATTTTGGTGGAACAAATGGCTAATTCATTGACCAAGGATGTTAAGTTTAGAGCAGCACTTGCAGCTGCTATATCGGGACAAATGTTGCACCAGAATTAA | 951 | 0.3712 | MDYSPWINTSLDLNINPQRSHQEALKNGMENNFFSLGLRNSSPKEESSDALVEELKRVSAENKKLTGMLTEMCENYNTLRNNMMEYMKKNPETKEVISFSKKRKSDEISSSNNNLIGVNGSNSESSSSDEDQSCKKPRELETCIKAKVSRVYFKTEASDSSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCTVKKKVQRSVDDPSVTVATYEGEHNHPHPSQMEPTNNRGRNQMNSAAPSSAAAPSTVTLDWTKKPKCRNDSSSKNMMINSNSKMEIPQILVEQMANSLTKDVKFRAALAAAISGQMLHQN | 316 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g00086 | 316 | Coils | Coil | 69 | 89 | - | - | |
Vifa5g00086 | 316 | MobiDBLite | consensus disorder prediction | 225 | 252 | - | - | |
Vifa5g00086 | 316 | SMART | WRKY_cls | 164 | 224 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa5g00086 | 316 | FunFam | WRKY transcription factor 40 | 149 | 226 | - | - | |
Vifa5g00086 | 316 | MobiDBLite | consensus disorder prediction | 109 | 128 | - | - | |
Vifa5g00086 | 316 | Pfam | WRKY DNA -binding domain | 165 | 223 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa5g00086 | 316 | SUPERFAMILY | WRKY DNA-binding domain | 162 | 225 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa5g00086 | 316 | MobiDBLite | consensus disorder prediction | 97 | 137 | - | - | |
Vifa5g00086 | 316 | Gene3D | WRKY domain | 133 | 226 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa5g00086 | 316 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 39 | 312 | IPR044810 | GO:0003700 | |
Vifa5g00086 | 316 | MobiDBLite | consensus disorder prediction | 215 | 252 | - | - | |
Vifa5g00086 | 316 | ProSiteProfiles | WRKY domain profile. | 159 | 225 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g00086 | Vifa-Chr5 | 11758997 | 11760387 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g00086 | 4 | 316 | WRKY Transcription Factor Family | AT1G80840 | 51.402 | 1.13e-95 | 283 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vifa5g00086 | WRKY | 2.5e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g00086 | - | - | gsj:114388658 | 384.415 |