Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00063 ATGGCGGATCTCAAAGAGCGGTTACTGCCACCAAAACCTGCATCGGCTTTTACTTTGAGAGAGGCTGCTGGTCGACCAACTGCCTCTGGAAGACATCCTTTTCAAGGGGTGGATGTTTTGGAGGTGAAGAAGCGAGGCCAGGGTCTTAAATCATGGATTCGTGTTGATACGTCTGGAAACTCTCAGGTGATGGAGGTAGACAAGTTTACTATGATGCGGCGATGTGATCTTCCTGCCCGTGATCTTCGTTTGCTTGATCCCGTGTTTGTTTATCCGTCAACAATCCTTGGTAGGGAGAAAGCTATTGTTGTAAATCTGGAGCAGATACGGTGTATTATTACAGCAGATGAGGTTCTTCTCTTGAATTCACTTGATAAATATGTATTGCAATATGTGATTGATCTCCAACGAAAGTTGACGACGACTGGGGCAGGGGAGGTTGGTGACGTAGGCGAGGTCTGGCAATCAGACAATTCTGACATGAACCAAAGGAGAGGCAATAGGAATTTTGAAAATTTATATAACAACACTTCCCCTGATTATTTACCTTTTGAATTCAGGGCTCTTGAAGTTGCCCTTGAGGCAGCATGCACATTTCTTGACACCCAGGCGGCAGAGTTAGAAATTGAGGCTTATCCGTTGCTGGATGAACTGACATCAAAGATCAGTACTCTTAATTTGGAACGTGTTCGTCGGTTGAAAAGTAGACTTGTTGCCTTGACTAGGAGAGTTCAGAAGGTTAGAGACGAAATAGAGCAGCTTATGGATGATGATGGTGATATGGCTGAAATGTACCTTACCGAGAAGAAAAGCCGGATGGAATTGTCATTTTATGGAGATCAGTCTATGATTGGATATAGATCAGCTGATGGTGCATCCATCTCTGCTCCAGTCTCTCCTGTTTCATCACCACCCGATTCTCGGAGGCTTGATAAGAGCTTGAGCATGGCTAGGAGTCGACACGAAAGCATGAGGAGTACCGAAAGTAATACCGAAAATATAGAAGAGCTTGAAATGTTGTTAGAAGCATACTTTGTTGTCATTGACAGCTCACTAAACAAGTTGACATCGCTAAAAGAATACATCGATGACACAGAAGATTTCATCAACATTCAACTGGATAATGTGCGGAATCAGCTTATCCAATTTGAGCTTTTGCTCACAACTGCAACATTTGTGGTTGCAATCTTTGGAGTGGTGGCAGGAGTATTTGGGATGAACTTTGAAATTCCATTATTTGATGTCCCATCTGCATTCCAATGGGTCCTTATAATAACAGGAGTCGTTGGAGTTTGTATATTTTCTGCATTTGTATGGTTCTTCAAATACAGAAGACTAATGCCGCTTTAG 1350 0.4289 MADLKERLLPPKPASAFTLREAAGRPTASGRHPFQGVDVLEVKKRGQGLKSWIRVDTSGNSQVMEVDKFTMMRRCDLPARDLRLLDPVFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDKYVLQYVIDLQRKLTTTGAGEVGDVGEVWQSDNSDMNQRRGNRNFENLYNNTSPDYLPFEFRALEVALEAACTFLDTQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMELSFYGDQSMIGYRSADGASISAPVSPVSSPPDSRRLDKSLSMARSRHESMRSTESNTENIEELEMLLEAYFVVIDSSLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNFEIPLFDVPSAFQWVLIITGVVGVCIFSAFVWFFKYRRLMPL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00063 449 Gene3D Magnesium transport protein CorA, transmembrane region 124 380 - -
Vifa5g00063 449 FunFam Magnesium transporter MRS2-1 40 123 - -
Vifa5g00063 449 MobiDBLite consensus disorder prediction 295 329 - -
Vifa5g00063 449 FunFam Magnesium transporter MRS2-1 387 447 - -
Vifa5g00063 449 Gene3D Magnesium transport protein CorA, transmembrane region 387 447 - -
Vifa5g00063 449 CDD Mrs2_Mfm1p-like 52 446 IPR039204 -
Vifa5g00063 449 Coils Coil 230 257 - -
Vifa5g00063 449 MobiDBLite consensus disorder prediction 311 329 - -
Vifa5g00063 449 Pfam CorA-like Mg2+ transporter protein 325 441 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vifa5g00063 449 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 386 439 IPR045863 -
Vifa5g00063 449 Gene3D - 37 123 - -
Vifa5g00063 449 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 26 447 IPR039204 -
Vifa5g00063 449 MobiDBLite consensus disorder prediction 295 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00063 Vifa-Chr5 8129400 8131914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00063 1 449 MRS2 Gene Family AT1G16010 82.889 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00063 K16075 - gmx:100779803 733.021