Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00060 ATGGATACTCTCACACTTGCTTTGGGTTTTCTCTCTCTCTCTTTGTTCCTCTTCCTTCTAAAGAGGTCTACTCACAAACATTCCAAGCTTCACCATGTACCAGTGGTTCCAGGTTTGCCAGTGATCGGGAATCTGCTGCAATTGAAAGAGAAGAAACCTCACAAGACATTCACAAGGATGGCTCACAAATATGGACCTATTTTCTCCATCCAAGCTGGTGCTTCCAAAATCATTGTTCTCAATACTGCTCAACTTGCTAAAGAGGCAATGGTTACTAGATATCCATCAATTTCAAAAAGGAAGCTATCAACGGCACTCACGATTCTAACTTCTGATAAATGTATGGTTGCTATGAGCGATTACAATGATTTTCACAAAATGGTTAAAAAACATATTCTTGCAAGTGTTCTTGGAGCCAATGCACAGAAGCGACTCCGTTTTCACAGAGAAGTTATGATGGAAAATATGTCCAGGAAGTTTAATGAACATGTGAAGACCCTCTCAGATTCTGCTGTTGATTTTAGGAAAATATTTGTGTCTGAACTTTTCGGACTAGCATTGAAGCAAGCTCTGGGAAGTGATATTGAATCCATTTATGTAGAGGATTTGACGACTACATTATCAAGAGAGGACTTATATAACACTCTAGTGGTTGATTTTATGGAGGGTGCAATTGAGGTGGATTGGAGAGATTTCTTTCCGTACCTGAAATGGATTCCAAATAAGAGCTTCGAGATGAAAATTCGTAGAGTGGATCACCAAAGAAAAATTATCATGAAGGCACTACTTAATGAGCAGAAGAAGCGGTTGGCATCAGGAAAGGAATTAGATTGTTATTATGATTACCTAGTATCAGAAGCTAAAGAAGTGACCGAAGAACAAATGATCATGCTGCTCTGGGAGCCAATTATTGAGACATCTGATACTACCTTAGTCACAACAGAATGGGCTATGTATGAACTCGCCAAAGACAAATATCGTCAGGACCGTCTGTATGAGGAGCTTCTAAATGTATGTGGACATGAAAAGGTTACCGATGAGCAATTATCTAAGCTACCTTACTTGGGGGCTGTATTCCATGAAACATTAAGGAAACATAGTCCTGTTCCGATTGTCCCACTAAGATATGTTGAAGAGGATACAGAATTGGGAGGATATCATATTCCTGCTGGATGCGAGATTGCGATAAATATATATGGATGCAACATGGATAGCGACTTGTGGGAAAATCCAGACCAGTGGATTCCAGAGAGATTTCTTGATGAGAAATATGTCCAAGCAGATTTGTACAAGACAATGGCCTTTGGAGGAGGGAAGAGGGTGTGTGCAGGCTCTCTTCAGGCCATGTTGATAGCTTGCACGGCTATCGGCAGATTGGTACAAGAATTTGAGTGGGAGCTGGGACATGGGGAAGAAGAGAATGTGGATACAATGGGCCTTACCACCCACAGGCTTCATCCCTTGCTAGTAAAACTCAAGCCAAGAAACCTTTCTAAGTAG 1500 0.41 MDTLTLALGFLSLSLFLFLLKRSTHKHSKLHHVPVVPGLPVIGNLLQLKEKKPHKTFTRMAHKYGPIFSIQAGASKIIVLNTAQLAKEAMVTRYPSISKRKLSTALTILTSDKCMVAMSDYNDFHKMVKKHILASVLGANAQKRLRFHREVMMENMSRKFNEHVKTLSDSAVDFRKIFVSELFGLALKQALGSDIESIYVEDLTTTLSREDLYNTLVVDFMEGAIEVDWRDFFPYLKWIPNKSFEMKIRRVDHQRKIIMKALLNEQKKRLASGKELDCYYDYLVSEAKEVTEEQMIMLLWEPIIETSDTTLVTTEWAMYELAKDKYRQDRLYEELLNVCGHEKVTDEQLSKLPYLGAVFHETLRKHSPVPIVPLRYVEEDTELGGYHIPAGCEIAINIYGCNMDSDLWENPDQWIPERFLDEKYVQADLYKTMAFGGGKRVCAGSLQAMLIACTAIGRLVQEFEWELGHGEEENVDTMGLTTHRLHPLLVKLKPRNLSK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00060 499 Pfam Cytochrome P450 36 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00060 499 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00060 499 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00060 499 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00060 499 CDD CYP77_89 63 488 - -
Vifa5g00060 499 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00060 499 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00060 499 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00060 499 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00060 499 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00060 499 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00060 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vifa5g00060 499 FunFam Ent-kaurene oxidase 2 25 497 - -
Vifa5g00060 499 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 6 496 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Vifa5g00060 499 Gene3D Cytochrome P450 25 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00060 499 SUPERFAMILY Cytochrome P450 29 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00060 Vifa-Chr5 7627632 7630235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00060 16 495 Cytochrome P450 AT5G25900 61.954 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00060 K04122 - gmx:100802970 753.051