Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g05069 ATGGATGAGGCTGCAATGAAGCCAACAATTGACATTATTGTGTGTTCTTCCATGAACAATCATCATGCTAGTGCTAAAAAAAGTGATGATTCAATTTCGAACCCAAGAACCAAGGCATCATCAGATTCAAAGTCAGCACCATTCTTAACTAAGATCCATGCAGGCTACTTTTTCATCTGTCTTTCCTTCGGTGCTCAAGCTTTGCTATGGAAGAGTTTAATACTCATTGCAACTATCTTATCTTTTCTCTATATGCTCAAGTGCATCTTGCACTTTAATGCAGTGAAGGATGAGTTTTCACATCATATTGGAGTTAACTACATGTATACTCCTTGGATTTCATATCTTCTCATGCTTCAATCGTCTCCACCTTCGATTGTTCCGAGAACTTGTTACTACGAGTTTCTTTGTCTGTCCTTTTCTTTTGTTGTATTTCTTCTTGATGTAAAACTATTCGGACAGTGGTTCACAACTGAAAAGAGGTTTCTGTCAGTGGTAGCAAACCCTGTTAACCTTGTTTCTGTTATAGGCAACTTGGTGGCGGCTCAAGCTGCGACAGAAATCGGTTGGAACGAGTGCGCGCTTTCAATGTTTTCGCTAGGAATGCATGGCAAGTTTAGCTTGGAAATCCATCTCAGGTTCTTTTCTCATCTCATCAAAGATGCTGTTCTTTCTCTCTTTGTTCCTTTTTCTTTCTCAGGCTTGCAGGCCAGGACTGTTCAAGAAAACTATAAAAAGGTGAAAAATAGCATGGCATCTGGTTTAATGCTGCTGATATGTATTGTGTCTGTTCTTGTTTTTGTTTTTCTGATGCTAACTACTGTACTCAAAATTGAGAAGCTGATGCATAAAAAAGCACCCACTAAATGA 870 0.3897 MDEAAMKPTIDIIVCSSMNNHHASAKKSDDSISNPRTKASSDSKSAPFLTKIHAGYFFICLSFGAQALLWKSLILIATILSFLYMLKCILHFNAVKDEFSHHIGVNYMYTPWISYLLMLQSSPPSIVPRTCYYEFLCLSFSFVVFLLDVKLFGQWFTTEKRFLSVVANPVNLVSVIGNLVAAQAATEIGWNECALSMFSLGMHGKFSLEIHLRFFSHLIKDAVLSLFVPFSFSGLQARTVQENYKKVKNSMASGLMLLICIVSVLVFVFLMLTTVLKIEKLMHKKAPTK 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g05069 289 Pfam Voltage-dependent anion channel 52 273 IPR004695 GO:0016020|GO:0055085
Vifa4g05069 289 PANTHER S-TYPE ANION CHANNEL SLAH3 37 73 IPR030183 GO:0006873|GO:0008308|GO:0016020
Vifa4g05069 289 Gene3D - 47 282 IPR038665 -
Vifa4g05069 289 MobiDBLite consensus disorder prediction 24 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g05069 Vifa-Chr4 1587769113 1587770344 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g05069 K26672 - gmx:100779095 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g05069 4 1587769113 1587770344 Vifa4g05069 4 1587769113 1587770344 ECH
Vifa1g09920 1 1621788000 1621789376 Vifa4g05069 4 1587769113 1587770344 ECH
Vifa1g02104 1 335802694 335803866 Vifa4g05069 4 1587769113 1587770344 ECH
Vifa4g05069 4 1587769113 1587770344 Vifa1g09926 1 1623546364 1623547020 PCT