Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa4g05067 | ATGAATTCAAGAGAGTTGAACATGATGAAATTTCCAATGAGTTTGATTAGCACTTGGTCTGATGATCATGATGATAATGATCATGGTGATGATCATCGCAGCAGCCGTGTTATTGTCGATGAAGTCGACTTTTTCTCGGATAGGAAGGAGAAATCGTCGTCGCCCGATGATCATGTTTCCATCAAGAATAATCAGATTTATGATCCTCATTGCACTCTCCATGATGCTGACCATGTCAACACCGGTCTACAACTTCTTATTACTAATATTGGAAGTGATTTGGATGATGAATCTACAATGAATGCTGGAGATAAACATGTCAAGAATCTTCAGTTGCAATTGCAAGAAGAGCTTAGACTAAAGAACGTAGAGAATCAACGGTTGAAGGAAAAGCTAAGCGATTTGCAAATGCGATATGTGTCCTTAATGCAACAGAATCAACGAAACGAAGCTTCGGAAAATGAGACTGTGAATGGAAAAGCTGAGGGGGGAGATGGTGTGATGGCTAGAAAGTTTGTGAATGGTTCATCATCAGAAGTAGTAGATGATCCAAAAGTATTAAATTCTCCTAATTTGGATGAAAGAAAGCCATCAAGATCGCCCCGGAACAACAATAAAACTGATCAGAAAGAGGTCGATCCAGATTCAACTGATCAACTGGTACAAGTTTGGGAGCCAAATAAGCTTCCAAGATTAAACCCCTCCAATGCTACTGATCAAGCTGCTGCGGAAGCTACTATGAGAAAAGCACGTGTCTCCGTCCGTGCGCGATCAGAAGCCCACATGATCAATGATGGGTGTCAATGGCGAAAGTATGGACAGAAAATGGCGAAGGGAAACCCTTGTCCTCGAGCATATTACCGATGCACAATGGCGGTCGGTTGCCCCGTTCGCAAGCAAGTTCAGCGTTGTGCTGATGACAGAACAATTCTGATAACAACATATGAAGGGACACATAGCCATCCACTGCCACCTGCTGCTATGCCGATGGCGTCGACCACCGCAGCCGCTGCCACGGTCTTACTATCTGGATCAATGTCAAGTGCTGATGGGGTGGTGAACCCAAATTTACTATCTAGAATTCTTCCAAATTGCTCATCTAGCATGGCCACACTCTCAGCAACAGCACCATTTCCTACTGTCACACTAGACCTCACACATGACAACACAGATAACAATAACAACCAAAATTCTCATTCCCAGTTTCACCTAGGACAGCCTCAAAACTTTGGATCAGGACAATTACCACAAGTCATTGCACAAGCACTTTACAACCAATCCAAATTCTCTGGCCTTCAACTGTCCCAAGATGTTGGAGGCTCTTCCCAATTGCACTCATCTCAACAAGCTTCATCACTCAGTGCTGCCATCACCGCCGATCCAAATTTCACCGCAGCAATCGCCGCCGCTATCTCCACCATAATTGGCGCTGGTTCTCCCAACAACAACAACAACAACAATCCTAATATCCTCAACAGTGCTGCTTACAATCAGTAG | 1497 | 0.4409 | MNSRELNMMKFPMSLISTWSDDHDDNDHGDDHRSSRVIVDEVDFFSDRKEKSSSPDDHVSIKNNQIYDPHCTLHDADHVNTGLQLLITNIGSDLDDESTMNAGDKHVKNLQLQLQEELRLKNVENQRLKEKLSDLQMRYVSLMQQNQRNEASENETVNGKAEGGDGVMARKFVNGSSSEVVDDPKVLNSPNLDERKPSRSPRNNNKTDQKEVDPDSTDQLVQVWEPNKLPRLNPSNATDQAAAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCADDRTILITTYEGTHSHPLPPAAMPMASTTAAAATVLLSGSMSSADGVVNPNLLSRILPNCSSSMATLSATAPFPTVTLDLTHDNTDNNNNQNSHSQFHLGQPQNFGSGQLPQVIAQALYNQSKFSGLQLSQDVGGSSQLHSSQQASSLSAAITADPNFTAAIAAAISTIIGAGSPNNNNNNNPNILNSAAYNQ | 498 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa4g05067 | 498 | Gene3D | WRKY domain | 248 | 325 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa4g05067 | 498 | MobiDBLite | consensus disorder prediction | 385 | 406 | - | - | |
Vifa4g05067 | 498 | FunFam | probable WRKY transcription factor 31 | 248 | 325 | - | - | |
Vifa4g05067 | 498 | SUPERFAMILY | WRKY DNA-binding domain | 256 | 324 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa4g05067 | 498 | Pfam | WRKY DNA -binding domain | 264 | 322 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa4g05067 | 498 | ProSiteProfiles | WRKY domain profile. | 258 | 324 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa4g05067 | 498 | MobiDBLite | consensus disorder prediction | 145 | 250 | - | - | |
Vifa4g05067 | 498 | MobiDBLite | consensus disorder prediction | 188 | 215 | - | - | |
Vifa4g05067 | 498 | SMART | WRKY_cls | 263 | 323 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa4g05067 | 498 | MobiDBLite | consensus disorder prediction | 478 | 498 | - | - | |
Vifa4g05067 | 498 | Coils | Coil | 107 | 145 | - | - | |
Vifa4g05067 | 498 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 98 | 487 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa4g05067 | Vifa-Chr4 | 1586713440 | 1586715482 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa4g05067 | 9 | 489 | WRKY Transcription Factor Family | AT1G62300 | 47.471 | 3.01e-122 | 367 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vifa4g05067 | WRKY | 7.4e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa4g05067 | - | - | mtr:11439068 | 556.984 |