Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g05057 ATGGCCAAAATTAGTTGTATAGCTTTGCCACCCTTAATCATTTTCATAATTTTGATGCTCTTTGTTTTTATGAGTTCTGGCTTTGGCATTCATGAGGAGAGATCTATATACTTAGTCTTATTGGAAGGAGATGCTGTCGCTTTTCATGGAGCGTCACAAAATGAAAATTCATCGATTATCACCAGAAATGCATCAAAGGAACATGAAAAGGACTTATTGGAATTTCACAACATGCTTCTACAAAGAACTTTGGAGAATGGAAGCTACGACAAACTCCATAGTTTCAAACACATAATCAATGGCTTCTCAGTCCACACAACTCCTTCTCAGGCAAAAAGACTCAAAGCTACACCGGGAGTGAAGTTGGTAGAAGAAGATAAAGGAGTGAAGAAAATGACAACATACACTCCTGATTTTCTTGACTTGCCACAAGGAGTTTGGGCACAAGAAGGAGGTGACAAAAATGCAGGTGATGGAGTTGTTATTGGTGTTATTGATAGCGGCATTAATCCAGTCCATCCAAGCTTTGGTTCGCAAACTTTCAGTACAAATATCTCTCACTTTTCTGGTGCTTGTGAGACTGGTCCACACTTTCCACCTGAATCTTGCAATGGAAAGATTGTTTCAGCTAAATATTTCTCAGCTGGGGCTCAAGCTACTGCTAAATTTAATGCTTCTGTTGATTTTCTTTCACCTTTTGATGGAGATGGACATGGCAGTCATGTGGCATCTATTGCTGCTGGAAATGCTGGTGTTTCTGTTGAAGTGAATGGTTTTTGTTATGGGCGAGCAAGCGGAATGGCACCACGCGCAAGGATTGCTGTTTATAAAGCTATCTACACATCCGTGGGAACTATGGCAGATGTTGTTGCAGCTATAGATCAAGCTGTACAAGATGGAGTAGATATCATATCACTCTCTATTGGACCAAATGGACCATCACAAGATACATTAACATTTCTTAGCATCTTTGATATTTCTTTATTATTTGCAAGAAAAGCTGGAGTTTTAGTGATTCAAGCTGCAGGTAACAATGGTCCATCATCTTCAAGTGTAGTATCATTTAGCCCATGGACTGTCAGCGTCGCGTCTTGCAACACAGACAGAAGATATACTTCTTCAATCCTTCTTGGAAATGGTCAAATAATAGACGGCGTTGGACTATCAGGACCAAGTTTTGGAAATGGAACAATTCTCCGTAAACTTGTATTAGCTAAGGATGCAGTAAAAACTAATGGAACATTCCCCCAAAATTCAGAGTACTTAGAAGAGTGCCAGCATCCAGAGGCTTTGGATCCTATTAAGGTGTTTGGAAGTGTCATAATCTGCAATTTCTCTGAAGGATTCCTGAATGGCACCTCAACAATTGCTGGCATTATCAGCACTGCCAAGGTGCTAGCATTTGAGGGTTTTATTCTGACTGCAAATCCGAGCTATGGCGATTATATTGCAGAGCCAATTCCTTTTGATATTCCTGGTATCTTGATTCCTTCTGTAGCTGATACCGAGGCTATAAAGAAATATTACGAAGAGCGAACAAAGAGAGACGAGAAAGGAACTGTTACGGAATTTGGTGCTATGTCATCTAAAGCGGAAGGAAGGGTTGCCTCTTTCAAAGGGCGATCACCGGTTGTCAGTAGGTTTTCATCGAGAGGTCCAGATATCATTGATGCAAAAAAAAATCTTGCTGATGTCCTTAAACCTGACATTCTAGCACCAGGGCACCAAATATGGGCTGCATGGAGCCCTATTAGTGCCAAACAACCTATGCTAACTGGTCATGATTTTGCATTATTATCTGGTACCAGCATGGCAGCGCCTCACGTGGCTGGAATCGCGGCTCTGATCAAGCAATACAATCCATCATGGAGTCCATCTATGATAGCATCTGCAATCACCACAACCGGCACAAAGTATGATAATCTTGGCGATCCTATGATGGCCGAAGCCTACAAGGTCAACACATTGCATCCATCCACTCCTTTTGATTTTGGGGCGGGCATTGTAAACCCGATTCGTGCCATTGATCCCGGCTTGGTCCTATCATCAGATTATCAAGATTTCATCAGCTTCTTGTGCTCTTTGCCAAACATCGATCCAAGTACAATAACAAGAGCAACAGGAGAACCTTGCAACAATCCATTTGATTATCCATCTAATTTAAACCTTCCATCGGTGACAATATCGGCACTAAGAGGATCAATTTCTGTGAGAAGAACTGTGATGAATGTAGGTAACACCACAGAGACATACTTGGGCTCTATTCTACCTCCTAATGGAACTTCAATTAGCTTGAATCCAACTTGGTTTACCATAAGTCCACAAGGAACACAAGATCTGGAAATACAAATCAATGTGAATCAGCCAATGGATAACTTTAGCTTTGGTGAAATTGTTTTGACAGGAAGTTTGGATCACATTGTAAGAATAACTCTCTCGGTTGTGCCCGTTTCAGTAGAGCAACATAAATTGTAA 2475 0.4113 MAKISCIALPPLIIFIILMLFVFMSSGFGIHEERSIYLVLLEGDAVAFHGASQNENSSIITRNASKEHEKDLLEFHNMLLQRTLENGSYDKLHSFKHIINGFSVHTTPSQAKRLKATPGVKLVEEDKGVKKMTTYTPDFLDLPQGVWAQEGGDKNAGDGVVIGVIDSGINPVHPSFGSQTFSTNISHFSGACETGPHFPPESCNGKIVSAKYFSAGAQATAKFNASVDFLSPFDGDGHGSHVASIAAGNAGVSVEVNGFCYGRASGMAPRARIAVYKAIYTSVGTMADVVAAIDQAVQDGVDIISLSIGPNGPSQDTLTFLSIFDISLLFARKAGVLVIQAAGNNGPSSSSVVSFSPWTVSVASCNTDRRYTSSILLGNGQIIDGVGLSGPSFGNGTILRKLVLAKDAVKTNGTFPQNSEYLEECQHPEALDPIKVFGSVIICNFSEGFLNGTSTIAGIISTAKVLAFEGFILTANPSYGDYIAEPIPFDIPGILIPSVADTEAIKKYYEERTKRDEKGTVTEFGAMSSKAEGRVASFKGRSPVVSRFSSRGPDIIDAKKNLADVLKPDILAPGHQIWAAWSPISAKQPMLTGHDFALLSGTSMAAPHVAGIAALIKQYNPSWSPSMIASAITTTGTKYDNLGDPMMAEAYKVNTLHPSTPFDFGAGIVNPIRAIDPGLVLSSDYQDFISFLCSLPNIDPSTITRATGEPCNNPFDYPSNLNLPSVTISALRGSISVRRTVMNVGNTTETYLGSILPPNGTSISLNPTWFTISPQGTQDLEIQINVNQPMDNFSFGEIVLTGSLDHIVRITLSVVPVSVEQHKL 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g05057 824 CDD Peptidases_S8_3 129 635 IPR034197 -
Vifa4g05057 824 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 162 173 IPR023827 -
Vifa4g05057 824 PRINTS Subtilisin serine protease family (S8) signature 600 616 IPR015500 -
Vifa4g05057 824 PRINTS Subtilisin serine protease family (S8) signature 157 176 IPR015500 -
Vifa4g05057 824 PRINTS Subtilisin serine protease family (S8) signature 234 247 IPR015500 -
Vifa4g05057 824 ProSitePatterns Serine proteases, subtilase family, histidine active site. 238 248 IPR022398 -
Vifa4g05057 824 Gene3D Peptidase S8/S53 domain 159 688 IPR036852 GO:0004252|GO:0006508
Vifa4g05057 824 ProSitePatterns Serine proteases, subtilase family, serine active site. 601 611 IPR023828 -
Vifa4g05057 824 SUPERFAMILY Subtilisin-like 132 679 IPR036852 GO:0004252|GO:0006508
Vifa4g05057 824 Pfam Subtilase family 157 650 IPR000209 GO:0006508|GO:0008236
Vifa4g05057 824 Pfam Peptidase inhibitor I9 64 130 IPR010259 -
Vifa4g05057 824 ProSiteProfiles Serine proteases, subtilase domain profile. 137 675 - -
Vifa4g05057 824 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 85 812 IPR045051 -
Vifa4g05057 824 Pfam Fibronectin type-III domain 720 814 IPR041469 -
Vifa4g05057 824 Gene3D - 692 816 - -
Vifa4g05057 824 CDD PA_subtilisin_like 374 516 - -
Vifa4g05057 824 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 31 131 IPR037045 -
Vifa4g05057 824 SUPERFAMILY Protease propeptides/inhibitors 87 129 - -
Vifa4g05057 824 Gene3D - 368 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g05057 Vifa-Chr4 1584482189 1584487555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g05057 36 814 Subtilisin-like Serine Gene Family AT1G62340 60.660 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g05057 - - psat:127138335 1506.5