Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g05052 ATGTTGCATTTAGTTGGTGTATTCACCGTGGGAGATGTTATTCCCTTTTTAAAACGATTTGATATCGGTGGCCATGTGAAGGCCATGAAAAAATCTTCCAAGGAGATGGACAAAATTTTAAATGAATTATTAGAGGAGCATCGCGGCGATAACAAGACTTTGAGTGAGAAGGATGATGTTGATCCTGATCATCAAGATTTCATGGATGTGATGCTTTCATTGCTTGATGGAACAATAGTTAAGGGATTCGATTCTGATACTACAATCAAAGGCACAATATTGGCATTGATTGTTGGAGGAGTTGACACAACTAGTGTAACTCTTACATGGGCAATATGTTTGTTACTGAAAAATCCTCATGTAAAGAAAAAAGCAAAAGAAGAACTTGACATTCAAGTTGAAAAAGAAAAGTGTATAGAAGTATCTCATATAGACAATTTGGTGGTTATTGATTCTATTGATATGAGTGAAGCTTTTGGAGTAACCAACACCAAAGCAACTCCTCTTGAAATTCTTATTAAGCCATGTTTATCTTCTAGTTATTATGAAAATATGTGA 558 0.3477 MLHLVGVFTVGDVIPFLKRFDIGGHVKAMKKSSKEMDKILNELLEEHRGDNKTLSEKDDVDPDHQDFMDVMLSLLDGTIVKGFDSDTTIKGTILALIVGGVDTTSVTLTWAICLLLKNPHVKKKAKEELDIQVEKEKCIEVSHIDNLVVIDSIDMSEAFGVTNTKATPLEILIKPCLSSSYYENM 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g05052 185 PRINTS E-class P450 group I signature 88 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g05052 185 PRINTS E-class P450 group I signature 108 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g05052 185 PANTHER CYTOCHROME P450 82C3-RELATED 152 182 - -
Vifa4g05052 185 Pfam Cytochrome P450 9 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g05052 185 Gene3D Cytochrome P450 1 157 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g05052 185 Coils Coil 26 46 - -
Vifa4g05052 185 SUPERFAMILY Cytochrome P450 3 151 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g05052 Vifa-Chr4 1581966399 1581967339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g05052 1 153 Cytochrome P450 AT4G31940 44.516 2.54e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g05052 - - gmx:100803451 177.178