Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g05049 ATGCACCAACAAACCCCCACTTATTCAACCACCCTTTTCTTCACCCTTCACGTAAAACAGCAACAACCGCACAAATACTCCCTCTCCGCGAGCTTGCTGCCGGAAATACTCCTTTCCGATTCCATTCCACCTCATTCTGCCATAACCACAATCTCACAACAACCCAGTATCACTTTGAAGCCAAAGACGGAATCTGGTATTGATTTGAAGCCGAAGCAGGGTGTTGTTTCGAAATCTGCTGCTCAGATCGTGCACGAGCAACATGGGAATTTGGCTCCTGCTGCTAGAATGGCTATGACACGTAGGGTGCATCCTCTAGTTTCTTTGAATCCTTATATGGGTAGTTGGACAATCAAGGTCAGTGTTACAAGCAAAGGAACCTTGCGTACATATAAGAATGCTAGAGGAGAAGGATGTGTATTCAATGTCGAGTTAACTGATGAAGATGGTACTCAGATTGAAGAAACAATGTTTAATGACACGGCGGTGGGCTTGAGATAG 501 0.4511 MHQQTPTYSTTLFFTLHVKQQQPHKYSLSASLLPEILLSDSIPPHSAITTISQQPSITLKPKTESGIDLKPKQGVVSKSAAQIVHEQHGNLAPAARMAMTRRVHPLVSLNPYMGSWTIKVSVTSKGTLRTYKNARGEGCVFNVELTDEDGTQIEETMFNDTAVGLR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g05049 166 CDD RPA1_DBD_A 105 162 - -
Vifa4g05049 166 Gene3D - 100 165 IPR012340 -
Vifa4g05049 166 FunFam Replication protein A subunit 102 165 - -
Vifa4g05049 166 SUPERFAMILY Nucleic acid-binding proteins 103 163 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g05049 Vifa-Chr4 1581287860 1581288360 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g05049 57 162 Core DNA Replication Machinery Family AT5G08020 74.528 2.21e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g05049 K07466 - zju:125422282 181.03