Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g05015 ATGGCTTATAGACGTTGCCTCTTGCAAAGAGGAAGCAACCTCATAGATCGTAGGTGTCACCCTTCCTTCAGCTATGTTCTCCATAGCGACGACACGAAACGCGATCAACCAGACGAGAAACCGTCTTTGGCTGGAATCAGTAATAGTTTTATTCAAACAAGGTCCTTTGGAAGCTCTTTTAATGGATCAATGGGTTTTTTCTCGGGTTTTCGACATAAGGAACTTTATCCATTTGCTGGATATAGTTTCTGCCGGAATATGTCGACGATGGATCAGAATTCAGATAAGATTACAGTAATGACTGATGTGGCTGATGTTCTCACTGACACTGCTATGGAGACTGTAACTTCTCATGCGGCTCCCGTTGTTAGCGAAGTTGCCATTGCTGCGGCTGATTCTTATTTGCCTGTACAAGCTTTACAGTATTTCATAGATGCTGTTCATTCCTACACTGGGCTAAACTGGTGGGCGGCCATAGCTCTGACGACTCTCTTGATTCGAACCGCAACTGTTCCACTCTTAATAAATCAACTCAAGACCACTTCTAAGCTTACGCTTATGAGGCCTCACTTGGAAGCAATAAAGGAAGAGATGGATGGGAAGACATTTGATCCCGAGGCTGTTGCCGAAGGTCAGAAGCGGATGAAAAAGCTATTCAAAGAATATGGTGTGAGTCCTCTTTCGCCATTGAAGGGACTTTTTATTCAAGGTCCTGTCTTCATTAGTTTTTTTCTTGCGATAAATAACATGTCTGAAAAAATGCCATCATTCAAGCATGGTGGAGCTTTCTGGTTTACCGATCTCACAACTCCCGATGCCTTATACGTTTTTCCAGTTTTGGCTGCATTATCGTTCTTAGTAGTAGTAGAGTGTAATATGCAAGAAGGAATGGAAGGAAATCCTATGGGTGACACAATGAAAAAATTCTCGAGGATTCTTGCTTTTCTGACAGTTCCTTTCACCATGACTTTTCCAAAGGCAATATTTTGTTACTGGATTACATCGAATTTGTTTTCACTGACGTATGGAATGGCACTTAAAGTTCCTGGTGTAAAGCAAACTTTAGGTATTCCTGATTTACCTGCTGCTCCAAAACCCACCAGTTCTCCGCAATCTTCCTTCTCTATATTATCAGCACTAAAGCAAGCTGCATCAGCTGCAAATGGTCAAAGCTCATTGCCTGTTGAAACACCAAAAGAACCAAACAAAAAGATACCTTCTTCTTCTTCTGCTGTTATTAGTCAGAGGCTTAGAAGCTTAGAGAAACAAGTAAAAGGAAGAAAGAAAAACAAGAAGTGA 1299 0.4149 MAYRRCLLQRGSNLIDRRCHPSFSYVLHSDDTKRDQPDEKPSLAGISNSFIQTRSFGSSFNGSMGFFSGFRHKELYPFAGYSFCRNMSTMDQNSDKITVMTDVADVLTDTAMETVTSHAAPVVSEVAIAAADSYLPVQALQYFIDAVHSYTGLNWWAAIALTTLLIRTATVPLLINQLKTTSKLTLMRPHLEAIKEEMDGKTFDPEAVAEGQKRMKKLFKEYGVSPLSPLKGLFIQGPVFISFFLAINNMSEKMPSFKHGGAFWFTDLTTPDALYVFPVLAALSFLVVVECNMQEGMEGNPMGDTMKKFSRILAFLTVPFTMTFPKAIFCYWITSNLFSLTYGMALKVPGVKQTLGIPDLPAAPKPTSSPQSSFSILSALKQAASAANGQSSLPVETPKEPNKKIPSSSSAVISQRLRSLEKQVKGRKKNKK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g05015 432 CDD 5TM_Oxa1-like 152 349 - -
Vifa4g05015 432 MobiDBLite consensus disorder prediction 388 417 - -
Vifa4g05015 432 Pfam 60Kd inner membrane protein 155 341 IPR028055 -
Vifa4g05015 432 NCBIfam membrane protein insertase YidC 154 341 IPR028055 -
Vifa4g05015 432 PANTHER OXA1 106 420 IPR001708 GO:0016020|GO:0032977
Vifa4g05015 432 MobiDBLite consensus disorder prediction 388 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g05015 Vifa-Chr4 1573950186 1573967021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g05015 70 431 Chloroplast and Mitochondria Gene Families AT2G28800 22.826 6.13e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g05015 K03217 - gmx:100817052 595.89