Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04972 ATGGCTCCCACTAAGACACATTCAATAACTCATTCACCATACAATTGGTTTACAAAGTCTACATATATATATCCATCATTGGGTTTACAAGCAAACACAAACCATTCATACCTTGAAGCATCAGAATTCAAGTTCACTTCTTTCTTCTATTATTTCTTGGAGATCGTTCTATTGTCAAGAAACAGAACAGGAATGGGTTTTCGTTTACCTAGTATTCTACGATCATCATTTAGTGCAGGCCAAGCATCTAGCAAAGTGGAAGTCCCAAAAGGCTATATCGCAGTTTACGTTGGAGAAAAAGCGAGGAGGTTCTTGATTCCGGTATCGTTCTTGAACGAACCTTTATTTCAAGAATTGCTTAGCCAAGCTGAAGAGGAATTTGGTTACTGTCATCCAATGGGCGGTCTTACAATTCCTTGCAAGGAAGATGTCTTCTTACATAGCTTGAACAACCTATGA 459 0.3856 MAPTKTHSITHSPYNWFTKSTYIYPSLGLQANTNHSYLEASEFKFTSFFYYFLEIVLLSRNRTGMGFRLPSILRSSFSAGQASSKVEVPKGYIAVYVGEKARRFLIPVSFLNEPLFQELLSQAEEEFGYCHPMGGLTIPCKEDVFLHSLNNL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04972 152 Pfam Auxin responsive protein 77 150 IPR003676 GO:0009733
Vifa4g04972 152 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 81 149 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04972 Vifa-Chr4 1564044225 1564044683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04972 87 145 Calmodulin-binding Proteins AT3G43120 57.627 2.12e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04972 K14488 - gmx:100500615 150.984