Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04967 ATGATAGAAGATGAGAAGAAGGGAGTAATTTACTCTCATATGCATGGAATCAAAGTAGAAGAGTATGGAATAAATTTTAAAAAAGTGGTTATATTGGGAAGTACGGGGAATTCAATATCGACTACAAAATACAACTTTTTCACCTTTCTGCCTAAAGGATTATTTGAACAGTTCAGACGGGTGGCTAATCTCTACTTTCTTACAATCTCAATTTTGTCAACCACCCCAATTAGTCTTGTCTCTCCAATAACTAATGTGCTTCCTCTATCTTTGGTGCTTCTCGTTTCTCTTATTAAGGAAGCTTTGGAGGACTGGAAACGTTTTCAAAATGATATGTCCATAAACAATAATGTGATAGATGTTTTACAAGATCATAAGTGGGCGCCTATGCCCTGGAAAAAGTTGCAGGTCGGAGATATTATCAAGCAATGTATCAATGAAGATGTTGAAAAGGACGATATAAATGATGAAATTCAAGAGGACGACATAAATGGTAAAATTCAAGAGGACGACCTAAATGATAAAATTCAAGAGGACGACGTAGATGACGAATTTCAAGAGGACGACATAGATCTAGATGATGAATTTCAAGAGGAGGATATAGATGGTGAATTTCAAGAGGACGACGTAGATGAAGAATTTATGGAGGATGACATATCTAACGAATTTCAAGAGGACGATCTGGATGCTTTACTCCTAGAAGACAAACTTGAATGA 717 0.3612 MIEDEKKGVIYSHMHGIKVEEYGINFKKVVILGSTGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLTISILSTTPISLVSPITNVLPLSLVLLVSLIKEALEDWKRFQNDMSINNNVIDVLQDHKWAPMPWKKLQVGDIIKQCINEDVEKDDINDEIQEDDINGKIQEDDLNDKIQEDDVDDEFQEDDIDLDDEFQEEDIDGEFQEDDVDEEFMEDDISNEFQEDDLDALLLEDKLE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04967 238 SUPERFAMILY Calcium ATPase, transmembrane domain M 37 126 IPR023298 -
Vifa4g04967 238 MobiDBLite consensus disorder prediction 163 182 - -
Vifa4g04967 238 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 25 149 - -
Vifa4g04967 238 Pfam Phospholipid-translocating ATPase N-terminal 36 85 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04967 Vifa-Chr4 1562443511 1562447623 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04967 36 142 Primary Pumps ATPases AT1G59820 79.439 1.59e-55 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04967 K14802 - gmx:100787473 191.43