Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04925 ATGGCAATAGCATTTACACAATGCTCAGAAAAGCTAGGCTACCTCATATTTCTATTAGGCAAAAACTTTGTTATGTTTATGGCAATGGTGATTGCATGCAATGGTGTACATTTTCTTCTAAAGCCTTATCAACAACCTCGTATTACTTCCGACATAATTGTCGGACTACTTATGGGAAATGTGCCGTTTTTACGTGATCTATATGGAAAATTCAACCATACATTTGGATTTATCATTGATTTTGGCATGATGTGTTACATGTTTGCTTTGGGGGTAGAAATGGATCCTTACGTACTCTTCAAGAAACCAACTAGAGAAGCTCAAGTTGCTTATGCAGGAGTAATCATCACATTCATCATAGCAGGTTCTGCAGCACCACTTCTCCATTACTTCACATTGGATCATCATGTACTAGAATTCACTCTCTCCCTCTCAACTCTTCTTGCAAGCACGGCGTCACCCGTCCTAACCCGCCTCATAACCAGTCTCAACATAGGAAAGTCGGATATCGGGAAACTAATCATAGCAGCAGGAATGTATTCGGATTTCATATGCTCTTTGCTTCTTTCAATCGGCTACATATCAATGCCGTTGGACACGTTTTGCACCAATATCGGGCAAAAAGGACGTCTCAAAAAGGCGATCGTAATGAATAGCGCTGTTCTTGGACAGGCATTGTTCACAGCAACAGTTTCGCCGGTTTTTATGAAATGGGTTGACAATGAAAATCCTGAAGGGAAACCTATGAAAGGCTCACACTTGGTGCTGTCAATTGCATTCATGGTGATGAGTTGCGCTTCATCGATACTATATAACTATAGTCCAGTTCTAAGTGCTTTTATAACAGGAATATGTTTTCCTAGGGAAGGAAGAGTTTCAAAATGGGTGATTAGCAAAATCAATTATTTGTTGACAACTATATTTTTTCCCATTTTTTTCTTGTGGATGGGTAATGCAGCTGATTTTAGGCAGTTTCAGCTAAGGGATTCTTGGATATGGGTAAAATTGTTTGGCCCTATTGCAATAGTAATGGTAGGTAAAGTTGTTGGAACACTTGTTTCTGGTGTAATGCTTGGATTTCATTGGCCTGAATCAATTGCTATTGGATTGTTGCTCAGCACAAAGGGACATTTTCATATCTACATGGCTATCAAAGTGATGGGTTGCGGCTCCGATCCTACTTCGGGTATTGCATTGGTGATTGCAATATTTTTTACAGTGGTGCACACCCCCGCAATCGTAGCACATATCATCAAACGCGCCAAGAGAAAATTGCCTATGCATCGCATGTCACTCCAATTGCTCGATCCATCAAGTGAGCTAAGAATTCTGCTATGCCTTCATGGACCTGAGAACATTTCTGCTTCCATCAACTTCATGGAGATCTCAAGAGGGAAATCAGACCCTGGGATTCTGGTATATGTCACAGAAATGATTGAACTAACTGATCAAATAGCAGTCACAGTAGAAAGAGGGGAAGGAGTAGAAACAACAAATGTGAAAGATAAGGATATCGTGCAGATGAGAGACCAAATAACTAGCTCGTTTCAAGCTTATATAAATGACGATGGTGATGGTGTTACGCTCAAAAGAACGATGGCGGTGTCAACTATCAATAACATGGCACAGGATATCTGCACTTTGGCAGAGGATTTGATGATTGCTCTTATCATACTACCATTCCACAGGAGCCAAACTACTGATGGAAAATTGGATGGTGGAAATCAAGGATTCAGATATGTGAACAGAAAGTTATTGAAGAGTGCTCCTTGTTCCGTGGGGATTCTAGTGAACAGAGGCTTAGGATCCTTTGAAAAATTATCGAAGACTCAAGTATCACTCAATGTGGCAACAGTGTTCATTGGTGGAAAAGATGATAGAGAAGCACTTGCCTATGCCGGACGCGTAGCAGGGCATCCGGGAGTAAAAGTCACAGTTATAAGATTCTTAGTAGATACCACTGTGGAATCTTCGAGAATGGCAGCATACAGGGTAAGTCTCTCAGAGAAAGTTGAAGAGATGGGCCTAGACGATGAATGCTTTGCGCAGTTTTACGATAAATATATATCCAGTGGTCAAATTTCATATATAGAGAAACATCTTGCTAATGCAGCTGAGACTTTCTCTACTCTCAGATCATTTGAAGGACAATACTCACTAGTTATTGTAGGAAGAGAAGGCGGACTAAACTCAATATTGACGAAGGGGATGAATGATTGGCAACAGTGCCCAGAACTGGGACCGATAGGGGATGTCCTTTCAGGACCCGACTTCTCAACAACAGTGTCTGTGTTGGTAATCCAACAACACAAACATAAAGGAGAAATAGATGGCCTTGACGAGGAATTCAACATCATGTAG 2361 0.41 MAIAFTQCSEKLGYLIFLLGKNFVMFMAMVIACNGVHFLLKPYQQPRITSDIIVGLLMGNVPFLRDLYGKFNHTFGFIIDFGMMCYMFALGVEMDPYVLFKKPTREAQVAYAGVIITFIIAGSAAPLLHYFTLDHHVLEFTLSLSTLLASTASPVLTRLITSLNIGKSDIGKLIIAAGMYSDFICSLLLSIGYISMPLDTFCTNIGQKGRLKKAIVMNSAVLGQALFTATVSPVFMKWVDNENPEGKPMKGSHLVLSIAFMVMSCASSILYNYSPVLSAFITGICFPREGRVSKWVISKINYLLTTIFFPIFFLWMGNAADFRQFQLRDSWIWVKLFGPIAIVMVGKVVGTLVSGVMLGFHWPESIAIGLLLSTKGHFHIYMAIKVMGCGSDPTSGIALVIAIFFTVVHTPAIVAHIIKRAKRKLPMHRMSLQLLDPSSELRILLCLHGPENISASINFMEISRGKSDPGILVYVTEMIELTDQIAVTVERGEGVETTNVKDKDIVQMRDQITSSFQAYINDDGDGVTLKRTMAVSTINNMAQDICTLAEDLMIALIILPFHRSQTTDGKLDGGNQGFRYVNRKLLKSAPCSVGILVNRGLGSFEKLSKTQVSLNVATVFIGGKDDREALAYAGRVAGHPGVKVTVIRFLVDTTVESSRMAAYRVSLSEKVEEMGLDDECFAQFYDKYISSGQISYIEKHLANAAETFSTLRSFEGQYSLVIVGREGGLNSILTKGMNDWQQCPELGPIGDVLSGPDFSTTVSVLVIQQHKHKGEIDGLDEEFNIM 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04925 786 FunFam Cation/H(+) antiporter 28 20 427 - -
Vifa4g04925 786 Gene3D - 21 426 IPR038770 -
Vifa4g04925 786 PANTHER CATION/H + ANTIPORTER 27 772 - -
Vifa4g04925 786 Pfam Sodium/hydrogen exchanger family 29 413 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04925 Vifa-Chr4 1548618957 1548621951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04925 24 786 Antiporter Super Family AT3G52080 47.558 0.0 769
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04925 4 1548618957 1548621951 Vifa4g04925 4 1548618957 1548621951 ECH