Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04902 ATGCAAGTGGGGTTTGTTCCCACCACCACACATGTCCTTACTGCTTACACACACCCCAAAACACCCGTGGGCTCTCCTTTGCCCCCACACACACTCCTCATGATCAATAAAAACAAAACAAAACCAAGCAAACTCTCTCAAAAGACAGTTCTCAAACAAATCCTAAAAAGATGTTCAAGCCTAACCAAGAAAAACGGCAACGATCAAGATGATGATGATGTTCAAGATCTTCCTCTTGATGTACCAAAAGGTCATTTCGCAGTTTACGTCGGAGAAAACAGAAGCAGGTACATTGTACCAATCACAGTCCTCACTCACCCTCAGTTTCAATCCCTACTTCGACAAGCCGAAGAAGAATTCGGCTTCGATCATCACACGGGCCTCACAATTCCTTGCCATGAAGTTGTTTTTCGCTCCCTAACATCAATCATGCTCAGATCATAA 444 0.4392 MQVGFVPTTTHVLTAYTHPKTPVGSPLPPHTLLMINKNKTKPSKLSQKTVLKQILKRCSSLTKKNGNDQDDDDVQDLPLDVPKGHFAVYVGENRSRYIVPITVLTHPQFQSLLRQAEEEFGFDHHTGLTIPCHEVVFRSLTSIMLRS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04902 147 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 79 143 IPR003676 GO:0009733
Vifa4g04902 147 Pfam Auxin responsive protein 59 143 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04902 Vifa-Chr4 1542771046 1542771615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04902 61 144 Calmodulin-binding Proteins AT5G20810 48.837 3.61e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04902 K14488 - csv:101210457 160.614