Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04899 ATGCTTCAAGATTATGGGAATAGAACTGGGAATAAAAGGCGTTTCATAATTGGGTCAATAAGTGGTTGTTCAAGCGAGAAGCTGTATCCTTTTGGGACTTCCACTTTGCTAGATGCTTGGCCTGCACTAAATGATGATCGTAGAATACTAGTTATTAGATGTGCTTCATTAAGCAAAAGCCGAACATCATCAAAGGTAATGAATATGCCAAAGGGCTATCTTGCCGTGTATGTTGGAGAAGAAATGAAGCGGTTTGTGATCCCCATGTCATACTTGAATCAAACTTCATTTCAAGACTTGTTGAGTCAAGCAGAGGAAGAATTCGGATATGATCATCCAATGGGTGGCCTCACAATTCCTTGCAAAGAAGACGTTTTCTTGCATATTACTTCTCGCTTCAATGGACTATAA 411 0.3966 MLQDYGNRTGNKRRFIIGSISGCSSEKLYPFGTSTLLDAWPALNDDRRILVIRCASLSKSRTSSKVMNMPKGYLAVYVGEEMKRFVIPMSYLNQTSFQDLLSQAEEEFGYDHPMGGLTIPCKEDVFLHITSRFNGL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04899 136 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 61 132 IPR003676 GO:0009733
Vifa4g04899 136 Pfam Auxin responsive protein 59 131 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04899 Vifa-Chr4 1541708608 1541712799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04899 41 129 Calmodulin-binding Proteins AT3G43120 42.391 1.47e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04899 K14488 - gmx:112997795 137.887