Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04896 ATGGGTATTCGTCTTCCATTTATGGTTCTTCATGCAAACAAGATATTCAAGTCATCGTCACAACATTTCCAAACTAGAAATCATTCCAATGTTCCAAAAGGACATGTAGCTGTCTATGTTGGAGAATCTCAAAAGAAACGATTTGTAGTTCCAATATCTTACTTATACCATCCTTCATTTCTTGACTTGTTGAATATAGCTCAAGAAGAGTTTGGCTACAATCATTCAATGGGTGGTCTCACTATTCCTTGCAAAGAAGAAGCATTTCTCAATCTTACGTCTCAACTGCGCTCATGCATCATGAAACATTGA 312 0.3654 MGIRLPFMVLHANKIFKSSSQHFQTRNHSNVPKGHVAVYVGESQKKRFVVPISYLYHPSFLDLLNIAQEEFGYNHSMGGLTIPCKEEAFLNLTSQLRSCIMKH 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04896 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 96 IPR003676 GO:0009733
Vifa4g04896 103 Pfam Auxin responsive protein 15 94 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04896 Vifa-Chr4 1540338656 1540338967 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04896 30 103 Calmodulin-binding Proteins AT3G43120 47.297 1.16e-15 66.6