Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04869 ATGTGTTATCATGATGTCAAGACCAAGTTGCAGGGAAAGGAGTCCGAATTGCTCATTGTTATTTTTCCTGATAATAATGGTTCTCTTTATGGTGACCTCAAGCGTATTTGTGAGACTGACCTGGGGATTGTTTCCCAGTGTTGTTTGACTAAAAATGTTTTTAAGTTGAACAAGCAGTACCTTGCTAATGTTTCATTGAAAATTAATGTTAAAGTTGGGGGTAGGAATACCGTGCTTGTTGATGCACTTTCACGATGCATTCCTCTAGTCGGTGACAGACCTACTATAATTTTTGGAGCTGATGTGACTCATCCTCACCCTGGCAAGGATTCAAGTCCACCAATAGCAGCTGTTGTTGCTTCTCATGATTGGCCAGAAATCACCAAATATGCTGGTTTGGTTTGTGCCCAAGCACGTCGGCAAGAATTAATTCAAGACCTTTTCAAACAATGGGAAGATCCAGTCAGAGGAACATTGACCGGTGGAATGATCAAGGAACTTCTTATATCATTCCGGAGAGCAACTGGTCAAAAACCTCAACGCATCATATTTTACAGAGATGGAGTGCCGAGAGGCCTTAGATGGTATTATTGA 594 0.4141 MCYHDVKTKLQGKESELLIVIFPDNNGSLYGDLKRICETDLGIVSQCCLTKNVFKLNKQYLANVSLKINVKVGGRNTVLVDALSRCIPLVGDRPTIIFGADVTHPHPGKDSSPPIAAVVASHDWPEITKYAGLVCAQARRQELIQDLFKQWEDPVRGTLTGGMIKELLISFRRATGQKPQRIIFYRDGVPRGLRWYY 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04869 197 Gene3D - 86 193 IPR036397 GO:0003676
Vifa4g04869 197 SMART Piwi_a_2 17 197 IPR003165 GO:0003676
Vifa4g04869 197 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 5 192 - -
Vifa4g04869 197 ProSiteProfiles Piwi domain profile. 17 197 IPR003165 GO:0003676
Vifa4g04869 197 Gene3D - 1 83 - -
Vifa4g04869 197 Pfam Piwi domain 18 191 IPR003165 GO:0003676
Vifa4g04869 197 SUPERFAMILY Ribonuclease H-like 9 190 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04869 Vifa-Chr4 1533904481 1533905074 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04869 3 192 Eukaryotic Initiation Factors Gene Family AT1G48410 83.770 2.82e-109 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04869 K11593 - gmx:100780375 345.895