Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04862 ATGGGTTTTCACTTACCTGGTATTAGACGATCATCATTCAGTGCAAGCCAATCATCTAGCAAAGAAGTGGAAGTTCCAAAAGGCTATCTTGCAGTGTATGTTGGAGAGAAAGCGAGGAGGTTCTTGATTCCAATATCATTCTTAAACGAGCCTTTATTTCAAGAATTACTGAGTCAAGCTGAAGAGGAATTTGGTTACTCTCATCCAATGGGTGGTCTAACCATTCCCTGCAAGGAAGATGTCTTCTTACATACAGCATCTCGCTTAAATGGTCTACAATTAATTCATATTGAATAA 297 0.3872 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNGLQLIHIE 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04862 98 Pfam Auxin responsive protein 10 87 IPR003676 GO:0009733
Vifa4g04862 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
Vifa4g04862 98 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04862 Vifa-Chr4 1532898599 1532898895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04862 14 82 Calmodulin-binding Proteins AT3G43120 53.623 9.37e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04862 K14488 - gmx:100500615 145.976