Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04804 ATGTCTCCAAGCAAAACTTTCATCTTCTTAGCTCTCTTATCCTTTTCACCACAACTCTTCCTAACAATTTCTTCTGCAGTAGAAGATAATGGCCTTCTCATGAACTACTACAAAGAATCATGTCCACAAGCCGAAGAAATCATCAAAGAACAAGTCAAACTCCTCTACAAACGCCACAAGAACACCGCTTTCTCATGGCTCAGAAACATCTTCCATGACTGTGCTGTTCAGAGTTGTGATGCTTCTTTGTTGCTGACATCCACAAAAAGAAGCTTGTCTGAGCAAGAACATGACAGAAGCTTTGGTTTGAGAAACTTTAGGTACATTGATACCATCAAAGAAGCTGTTGAAAGAGAGTGTCCTGGTGTTGTTTCTTGTTCTGATATCCTTGTTCTTTCAGCCAGAGATGGAGTTGTTTCGCTAGGAGGTCCTTATATTCCATTGAAAACTGGAAGAAGAGATGGTAGAAAGAGTAGAGTGGATCTGTTGGAGGAGTACCTTCCTGACCACAATGAATCAATTTCTTCTGTTCTTGACAAGTTTGGTGCCATGGGAATTGACACTCCTGGAGTTGTTTCTTTGCTTGGAGCACACAGTGTTGGTAGAACACATTGTATAAAACTAGTGCACCGTTTATATCCAGAAGTTGATCCAGCTTTGAATCCAGATCACATTCCACACATGCTAAAGAAGTGTCCTGATTCAATCCCTGACCCTAAGGCAGTTCAATACGTGAGAAATGACCGTGGTACCCCCATGATTCTTGACAACAATTACTATAGAAATATTCTTGACAACAAGGGGCTTTTGATAGTGGATCATCAACTAGCACATGACAAAAGAACAAGGCCTTATGTGAAGAAAATGGCCAAGAGTCAAGAGTATTTCTTCAAGGAGTTTTCTAAAGCTATTACATTGCTTTCTGAGAATAATCCTCTAACCGGTTCAAAAGGTGAGATTAGAAAAGAGTGCAGTGTTGCTAACAAACAACATCATGATGAGCCTTGA 1008 0.4028 MSPSKTFIFLALLSFSPQLFLTISSAVEDNGLLMNYYKESCPQAEEIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLTSTKRSLSEQEHDRSFGLRNFRYIDTIKEAVERECPGVVSCSDILVLSARDGVVSLGGPYIPLKTGRRDGRKSRVDLLEEYLPDHNESISSVLDKFGAMGIDTPGVVSLLGAHSVGRTHCIKLVHRLYPEVDPALNPDHIPHMLKKCPDSIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLAHDKRTRPYVKKMAKSQEYFFKEFSKAITLLSENNPLTGSKGEIRKECSVANKQHHDEP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04804 335 Gene3D Peroxidase, domain 2 168 307 - -
Vifa4g04804 335 ProSiteProfiles Plant heme peroxidase family profile. 31 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 Gene3D - 35 328 - -
Vifa4g04804 335 Pfam Peroxidase 49 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 FunFam Peroxidase 168 307 - -
Vifa4g04804 335 PANTHER - 19 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 SUPERFAMILY Heme-dependent peroxidases 32 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 CDD secretory_peroxidase 31 326 IPR033905 GO:0004601|GO:0042744
Vifa4g04804 335 FunFam Peroxidase 35 177 - -
Vifa4g04804 335 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g04804 335 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04804 Vifa-Chr4 1515922146 1515923897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04804 4 331 Peroxidase AT4G21960 77.439 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04804 K00430 - gmx:547513 583.178