Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04773 ATGGTTTCTTCACAACTCAAATTCACATCTTCTTCGTTACCTTTTACACCTATTTCTTCCTCCAAACCTAAACTTTCCACAACGGTTACTACTACTACTACTACTATTCACAATGTTGCAAAAAACACTATACATTTTAAACCGCTCTACCTTTCATCCACTCAGAGTTTCGGTTTTGCGAGTGCGAAACTCCGAAAGAGTGGAACAGAGCTTCATGCATATGAAGCAGATAGGTCTAGGTCTGACTCAGAGCCAGAGCCAGAGCCATTGGAGATTAACATTGGTGTGCCTTCTGAACCTGCAGCTCAGAACACGAAAATCGGTTTGTATTTTGCTACTTGGTGGGCTTTGAATGTTGTGTTCAATATTTACAACAAGAAGGTTTTGAATGCGTTTCCTTATCCATGGCTTACTTCAACTTTATCACTTGCGGCTGGTTCTCTCATTATGTTGATTTCATGGGCTACAAAACTCGCTGATGCTCCTAAAGTTGATTTCTATTTTTGGAAGGCTTTGTTTCCGGTTGCAGTGGCACATACAATTGGGCATGTTGCAGCTACTGTGAGTATGTCTAAAGTTGCAGTTTCGTTTACACATATAATCAAGAGTGGAGAACCTGCTTTTAGTGTTTTGGTATCAAAGTTTTTGCTTGGTGAATCTTTTCCTTTGCAAGTTTACCTTTCACTCTTGCCGATTATTGGAGGTTGTGCACTTGCTGCTGTTACTGAACTTAATTTCAATATGATTGGGTTTATGGGGGCTATGATATCCAATGTGGCCTTTGTGTTTAGGAATATATTTTCAAAGAAGGGAATGAAAGGAATGTCTGTTAGTGGAATGAACTACTATGCTTGCCTCTCTATATTATCTCTATTGCTTCTCACCCCTTTTGCTATTGCTGTCGAAGGCCCAGCGATGTGGGCTGCTGGCTGGCAAACAGCAGTGTCTCAGATTGGTCCCAATTTTGTATGGTGGGTAGCTGCACAGAGTGTCTTCTACCACTTGTACAATCAAGTATCTTATATGTCTCTTGATCAGATTTCTCCATTAACATTTAGCATAGGTAACACAATGAAGAGAATCTCCGTTATCGTCTCATCCATCATCATCTTCCGCACACCAATTCAGCCAAACAATGCCCTTGGAGCTGCCATTGCAATCCTTGGCACCTTCCTCTATTCGCAGGCTAAACAGTAA 1197 0.411 MVSSQLKFTSSSLPFTPISSSKPKLSTTVTTTTTTIHNVAKNTIHFKPLYLSSTQSFGFASAKLRKSGTELHAYEADRSRSDSEPEPEPLEINIGVPSEPAAQNTKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLIMLISWATKLADAPKVDFYFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSKFLLGESFPLQVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNVAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLLLTPFAIAVEGPAMWAAGWQTAVSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFRTPIQPNNALGAAIAILGTFLYSQAKQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04773 398 PANTHER SOLUTE CARRIER FAMILY 35 106 397 - -
Vifa4g04773 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 241 - -
Vifa4g04773 398 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 106 397 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vifa4g04773 398 Pfam Triose-phosphate Transporter family 106 394 IPR004853 -
Vifa4g04773 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 297 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04773 Vifa-Chr4 1506470710 1506472653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04773 45 398 Antiporters AT1G61800 79.661 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04773 K15283 - gmx:100804205 568.54