Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04684 ATGGAGTTCAAATTTCGCGCTGTCGACATCGTCAAACCAACAGCAACTTCGCATTCTCCTTCTCCAGTCGCATATCTCCTCGATCGATCACTTCAAGTGGAAGCTGGTTTTTCTGGTTTCCGATCACCATTAACCGGAGAGGAGGCACTGCGGCGAGAACTTGAGAAGGAGCAAATCCGTCGAGAAATATTGCGGCGGATGGAGTTGGAGGAAGAAGTGAGGAGGGAACTTGCAATTGAGAGAGAATTGGGGATTTCAATACCAAGACCGCTGAATATTCATGGACTAGTGTCGCAGTGGTCAAATTCAGTTGCTGTTGACCATATCGATGCGTCGCAACCACAGTTGATTTTGCCTCCTACGGAAATCAAACCTTCTCCAGAGATCAGTAACGAGGACAAAGTTATAGTCTTGACTAGGCCAGATCCTGAACTCTATAATGCAAAGCGAAAAGCAACAACATTGACTGAGATTGAGCCTTCTGCATTTGGTTTGAAGAAAAAACTGGAGGAGGAGTGGAGTTGTGCACTGTGTGAGATTAAAGCCACAAGTAAGAGTGGTTTGAATGCTCATCTGAATGGTAAGAAGCACAAGATCAAGGAAGCTAGACAAAATAGGAAGATTTGCATGAATAACAAAAAAGGTGAAAACTTTGTGAATGTAAAAACTACTGAAACAGTGAATACAATGATGGTTCATAAGAACGCTAATGAATCTAAAAATGAGGTTCAACTTATGGAAACAGTGGATGATAATGATGTGAGTGGGACAATATTCAAAAATGAGAAGAAGCATCTGGAAATAGTGGTTTATAAAAATGGGGAACAGGATACGGAGAAAAGCCAAAGTTTGGAAAGTATTAAGGACACTAAGAAAGCAGGAAAGATAAATGTAACATTTGGTCAAAACAATTCTAGTCCTCCGTCCACATATTCTGTATCATAA 945 0.4106 MEFKFRAVDIVKPTATSHSPSPVAYLLDRSLQVEAGFSGFRSPLTGEEALRRELEKEQIRREILRRMELEEEVRRELAIERELGISIPRPLNIHGLVSQWSNSVAVDHIDASQPQLILPPTEIKPSPEISNEDKVIVLTRPDPELYNAKRKATTLTEIEPSAFGLKKKLEEEWSCALCEIKATSKSGLNAHLNGKKHKIKEARQNRKICMNNKKGENFVNVKTTETVNTMMVHKNANESKNEVQLMETVDDNDVSGTIFKNEKKHLEIVVYKNGEQDTEKSQSLESIKDTKKAGKINVTFGQNNSSPPSTYSVS 314
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04684 314 Coils Coil 47 72 - -
Vifa4g04684 314 Gene3D Classic Zinc Finger 165 207 - -
Vifa4g04684 314 Pfam Zinc-finger of C2H2 type 173 197 - -
Vifa4g04684 314 SUPERFAMILY beta-beta-alpha zinc fingers 164 207 IPR036236 -
Vifa4g04684 314 PANTHER OS06G0651300 PROTEIN-RELATED 1 264 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vifa4g04684 Vifa-Chr4 1483566620 1483568467 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04684 173 292 C2H2 Transcription Factor Family AT2G19380 27.439 3.75e-06 46.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04684 - - psat:127138448 357.066