Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04674 ATGACTTCAAGCTCTGCTGCTGGAACGCATATCGCAGATGAAATCAAGAGAGAAATACTTCAAATTTGTTCAAGACTGGAAGCAAACTTCATAAAAAAAACAAAAGCGATGGTGGAGGAAGAGAAGTTAGAGCTTGAAAGTCAAGCAATTGCAAGAATACTGAATAAGTTGACTCCAGAAAATTTTGATCTTTTTAAGGGTCAGTTGAACGATTCTGGCATTACATCGGCTGATATATTCAAGGGAGCTGTTTCACTGATATTTGATAAGGCAGTATTTGAACCAACATTCTGCCCCATGTATGCGCAACTGTGTTCTGTTCTGAACGACAAGCTGCCTCCGTTCCCATCTGAAGAACCTGATGGCAAAGAAATAACTTTTAAGAGAGTACTCTTGAATAACTGCCAGGAAGCTTTTGAAGGCGCTGGTAAACTGAGGGAAGAATTGGCGCAGATGACTTCCCCTGAGCAAGAGTTGGATCGACATGTCATGGAAAGAGTTGTCAAGATTCGTACCCTTGGAAACATCCGTTTAATTGGTGAGTTGTGGAAGCAAAATATGGTTCCTGAAAAGATTATCCATCACATTGTTCAGGAGCTTTTGGGAGTTTCTGACAGCAAGGTCTGTCCAGCTGAGGAAAATGTTGAAGCCATATGTCTTATTTTCAACACTATTGGCAAGCAGCTTGACGAAAGCCCAAAATCACGACGTATAAATGATATGTATTTTGGCCGATTGAAGGAATTGAGCACCAATCCCCAACTTGTACCAAGGATGAGATTCATGGTGCGCGATGTTATAGATTTGCGTGCTAGTAACCGGATCCCTAGACCTGAAGAGCAAGAGTTCACCTCGAAACTTGAAAGCTTTGGCTCAATTGATAGGAAACGACTTATAGAAGACGATGATGGATGCAATAGATGTGATGTGATGATAGAGTATTTGAGAAAATTTGGCCGAGATTTTGGGATGGAATTTGGAAGAGAATTTGGGTCAAAACTCTGTTCGAAGGATATGGAAGATATGAAGAACATGTTAGAGAGCACAAGGAAGAAATTGGCTTTTCTAGTTGTACTACTTATTTGTTCTTGGGTTTACTTTGTCATAGTTTTAACAGCCTGA 1122 0.4046 MTSSSAAGTHIADEIKREILQICSRLEANFIKKTKAMVEEEKLELESQAIARILNKLTPENFDLFKGQLNDSGITSADIFKGAVSLIFDKAVFEPTFCPMYAQLCSVLNDKLPPFPSEEPDGKEITFKRVLLNNCQEAFEGAGKLREELAQMTSPEQELDRHVMERVVKIRTLGNIRLIGELWKQNMVPEKIIHHIVQELLGVSDSKVCPAEENVEAICLIFNTIGKQLDESPKSRRINDMYFGRLKELSTNPQLVPRMRFMVRDVIDLRASNRIPRPEEQEFTSKLESFGSIDRKRLIEDDDGCNRCDVMIEYLRKFGRDFGMEFGREFGSKLCSKDMEDMKNMLESTRKKLAFLVVLLICSWVYFVIVLTA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04674 373 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 52 282 IPR045208 GO:0003743
Vifa4g04674 373 SMART if4_15 47 273 IPR003890 GO:0003723|GO:0005515
Vifa4g04674 373 Pfam MIF4G domain 52 273 IPR003890 GO:0003723|GO:0005515
Vifa4g04674 373 Gene3D - 36 273 - -
Vifa4g04674 373 SUPERFAMILY ARM repeat 43 273 IPR016024 -
Vifa4g04674 373 Coils Coil 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04674 Vifa-Chr4 1481755553 1481757778 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04674 48 280 Eukaryotic Initiation Factors Gene Family AT2G24050 67.811 3.31e-107 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04674 K03260 - gmx:100781275 380.178