Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04645 ATGGCAGTCACATTGTATAACCCTAAATCTGAATCTGGGTTGAAGAAACTTGATGAGTACCTTCTAACCCGCAGTTACATCACCGGGTACCAAGCATCAAAGGATGATATCACTGTCTATTCAGCTTTGGCATCAGTTCCATCGGAGGAATATGTCAATGTTGCTAGGTGGTACAAGCACATTGATGCTTTGTTGAGAATTTCTGGTGTTTCTGGCGAGGGATCTGGTGTCATTGTGGAATCTTCTCTTGTGGCGGAAGATGCTATTGCCACTCCTCCAGTTGCCGACACAAAGGCCACTGAAGCTGAGGATGATGATGACAGTGATGTGGATTTGTTTGGTGAAGAGACTGAGGAAGAGAAGAAGGCAGCTGAGGAACGGGCAGCAGCCGTGAAGGCTTCTGGCAAAAAGAAAGAGAGTGGAAAATCATCTGTATTGTTGGATGTTAAGCCATGGGATGATGAAACTGACATGAAAAAGCTTGAAGAAGCAGTGAGATCTGTTAAGTTGGATGGCTTGTTATGGGCCAAACTTGTTCCTGTTGGGATTATCTTACCGTTGAGCCCATCAATGAGTATGTCCAGAGTTGTGACATTGTTGCCTTCAATAAAATATAATCTGCTATTTATGTGA 633 0.4376 MAVTLYNPKSESGLKKLDEYLLTRSYITGYQASKDDITVYSALASVPSEEYVNVARWYKHIDALLRISGVSGEGSGVIVESSLVAEDAIATPPVADTKATEAEDDDDSDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVKLDGLLWAKLVPVGIILPLSPSMSMSRVVTLLPSIKYNLLFM 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04645 210 Gene3D - 2 75 - -
Vifa4g04645 210 SUPERFAMILY GST C-terminal domain-like 9 67 IPR036282 -
Vifa4g04645 210 Pfam EF-1 guanine nucleotide exchange domain 144 182 IPR014038 GO:0003746|GO:0006414
Vifa4g04645 210 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 9 183 - -
Vifa4g04645 210 FunFam Elongation factor 1-delta 1 3 78 - -
Vifa4g04645 210 CDD EF1B 140 182 IPR014038 GO:0003746|GO:0006414
Vifa4g04645 210 SUPERFAMILY eEF-1beta-like 139 179 IPR036219 -
Vifa4g04645 210 Coils Coil 114 134 - -
Vifa4g04645 210 Gene3D - 135 189 IPR014717 -
Vifa4g04645 210 FunFam Elongation factor 1-beta 1 like 136 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04645 Vifa-Chr4 1471278597 1471280306 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04645 7 182 Eukaryotic Initiation Factors Gene Family AT2G18110 77.095 5.45e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04645 K03232 - gmx:100777627 234.572