Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04644 ATGGCAGTCACATTGTATAACCCTAAATCTGAATCTGGGTTGAAGAAACTTGATGAGTACCTTCTAACCCGCAGTTACATCACCGGGTACCAAGCATCAAAGGATGATATCACTGTCTATTCAGCTTTGGCATCAGTTCCATCGGAGGAATATGTCAATGTTGCTAGGTGGTACAAGCACATTGATGCTTTGTTGAGAATTTCTGGTGTTTCTGGCGAGGGATCTGGTGTCATTGTGGAATCTTCTCTTGTGGCGGAAGATGCTATTGCCACTCCTCCAGTTGCCGACACAAAGGCCACTGAAGCTGAGGATGATGATGACAGTGATGTGGATTTGTTTGGTGAAGAGACTGAGGAAGAGAAGAAGGCAGCTGAGGAACGGGCAGCAGCCGTGAAGGCTTCTGGCAAAAAGAAAGAGAGTGGAAAATCATCTGTATTGTTGGATGTTAAGCCATGGGATGATGAAACTGACATGAAAAAGCTTGAAGAAGCAGTGAGATCTGTTAAGTTGGATGGCTTGTTATGGGGTGCATCCAAACTTGTTCCTGTTGGGATTATCTTACCGTTGAGCCCATCAATGAGTATGTCCAGAGTTGTGACATTGTTGCCTTCAATAAAATATAATCTGCTATTTATGTGA 639 0.4382 MAVTLYNPKSESGLKKLDEYLLTRSYITGYQASKDDITVYSALASVPSEEYVNVARWYKHIDALLRISGVSGEGSGVIVESSLVAEDAIATPPVADTKATEAEDDDDSDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVKLDGLLWGASKLVPVGIILPLSPSMSMSRVVTLLPSIKYNLLFM 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04644 212 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 9 185 - -
Vifa4g04644 212 Gene3D - 135 191 IPR014717 -
Vifa4g04644 212 Pfam EF-1 guanine nucleotide exchange domain 144 184 IPR014038 GO:0003746|GO:0006414
Vifa4g04644 212 SUPERFAMILY eEF-1beta-like 139 184 IPR036219 -
Vifa4g04644 212 Gene3D - 2 75 - -
Vifa4g04644 212 SMART EF1_GNE_2 142 210 IPR014038 GO:0003746|GO:0006414
Vifa4g04644 212 CDD EF1B 140 184 IPR014038 GO:0003746|GO:0006414
Vifa4g04644 212 Coils Coil 114 134 - -
Vifa4g04644 212 FunFam Elongation factor 1-delta 1 3 78 - -
Vifa4g04644 212 FunFam Elongation factor 1-beta 1 like 136 189 - -
Vifa4g04644 212 SUPERFAMILY GST C-terminal domain-like 9 67 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04644 Vifa-Chr4 1471278597 1471280306 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04644 7 184 Eukaryotic Initiation Factors Gene Family AT2G18110 78.771 7.51e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04644 K03232 - gmx:100777627 244.588