Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04619 ATGGGTGTTTTAGATGGTTATTTTCCTGTAATGGTTATGATAGGGTTACAGTTTCATTATGCACTGCTTGCAATGTTTACAAGAGCTGCTCTACTAGATGGATTGACTCCAACTGTCTTTGTAGTGTATAGGCAAGGCATAGCCACTTTGTCATTGGCACCTATCATTTTTTCGTCTTATAAAAGGAGACAATCTTTGAAGGCTTCACTAGGATGGAAGAGTTTCTCTTTGATGTTTATGACCTCTCTTATTGGGGTTACAGCAAATCAGAATGCATATTTTAGTGGTTTATTCTATGCATCTTCTACAGCAGCCACTGCTATGAGTAATTTGATACCTGCATTAACTTTTGTATTTGCAGCAATTTTGGGATTTGAGAAAATCGATCTTCGAAGTTTAAGAAACGTGGCCAAGATATTAGGTACAATTTGTTGTGTTAGTGGAGCCTTAACCATGGCATTTATCAAAGGACATAAGCTGTTACACATGGAGTTTTTTCTTCCTGATTCCATACATCTCACTGCTAGTGGAGATGATACCTGGATTCTTGGTTGTTTGTTGCTCTTAGCAAGTAGTGTTTTTTGGTCATGTTGGATGATTATGCAGGTACCGATTTCTTCGTATTGCCCGGATCATATATTATCGACGTTTTGGATGTGTCTATTCGCTACGATACAGTCAACTATATTTGCACTGCTGAAAGAGCAGAATCTTCAAACATGGATTTTACCTTCACCTTTACAAATTTCATGCAGTTTATATGCGGGAATTGGAATTGCGGTAAGCTTTTTCATTCAATCGTGGTGCATATCAGAAAGAGGTCCATTGTATTGTGTAATGTTCAACCCTCTAGCAACTGTCATCACAGCATTGGTAGCTGCAACGTTCCTAGAAGAAGAGCTATACGTTGGAAGTTTGGTTGGGGCTGTTGGAGTGATCACTGGTTTGTATATTGTGTTATGGGGTAAAGCCAAAGACTTTGATGGGACTAAACAAAAGCTTCCACAATCAAACATGGAGGATGTTGAAAGAAGTAATAGAATAGATTTGGAAGAACCACTTCTTGCAGAGAAATCAGAATCTGTAGCGGAGATAAAACTGGAGCGCTAA 1110 0.3865 MGVLDGYFPVMVMIGLQFHYALLAMFTRAALLDGLTPTVFVVYRQGIATLSLAPIIFSSYKRRQSLKASLGWKSFSLMFMTSLIGVTANQNAYFSGLFYASSTAATAMSNLIPALTFVFAAILGFEKIDLRSLRNVAKILGTICCVSGALTMAFIKGHKLLHMEFFLPDSIHLTASGDDTWILGCLLLLASSVFWSCWMIMQVPISSYCPDHILSTFWMCLFATIQSTIFALLKEQNLQTWILPSPLQISCSLYAGIGIAVSFFIQSWCISERGPLYCVMFNPLATVITALVAATFLEEELYVGSLVGAVGVITGLYIVLWGKAKDFDGTKQKLPQSNMEDVERSNRIDLEEPLLAEKSESVAEIKLER 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04619 369 PANTHER WAT1-RELATED PROTEIN 9 326 IPR030184 GO:0016020|GO:0022857
Vifa4g04619 369 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020
Vifa4g04619 369 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020
Vifa4g04619 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 155 - -
Vifa4g04619 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04619 Vifa-Chr4 1466489104 1466490800 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04619 1 369 Nodulin-like Gene Family AT4G30420 44.094 5.27e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04619 - - psat:127138496 570.852