Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04617 ATGAGTGGTTTATTGATTGTTATGATTATGATAGGGTTACAAATTCATTATACAGTGCTTGCAATATTGATAAAACATGCTTTTTCCGATGGATTGAGTCCAACAATCTATGTAATGTATAGGCAAGGCATAGCAACTTTGGCATTGGCACCTTTCATCTTTCTCTCTAATAAGAGGAGACGATCTTTGAGGTCATCACTAGGATTAAAGGGTATCTCATGGATGTTTTTGACATCACTTTTTGGGGTTACAGTAAATCAGAATGCATATTTTTGTGGTTTATACTATGCATCCTCTACCGTAGCTACTGCTATGACTAATTTGATACCTGCATTTACTTTTGTATTAGCAGCACTTTTGGGATTTGAGAAAATTGACCTTCGAAGTTTAAGAAGCATAGCCAAAATATTAGGGACGATTTGTTGTGTCAGTGGAGCCTTAACCATTGCATTTCTCAAAGGAAATAAATTGGTACTCATGGAGTTTAGTCTTTCTGATCCCAAATATCTCACTGCTAGTGGAGATGATAATTGGATTCTGGGTTGTTTGTTGCTCTTAGCAAGTAGTATTTTTTGGGCGTGTTGGATGATTATGCAGATACCAATTTCTTCATACTGCCCGGATCATATGTTATCGTCTTTTTGGATGTGTCTATTTGCAACAATACAGTCGGCTATATTTGTTGTGATCCAAGAAAATCATGTTCAATCAAGGATTTTACATTCACCTTTACAAATTTCATGCATTTTATATTCAGGAATTGGAATTGCGATTAGCTTTTTCGTTCAATCGTGGTGCATATCACAAAGAGGTCCATTGTATTGTGTAATGTTCAACCCTCTAGCAGCTGTCTTCACAGCTTTGGTAGCTACTACGTTTCTACATGAACAACTTTATGTTGGAAGCTTGGTGGGGGCTCTTGGAGTGATAGTTGGTTTGTATTTTGTGTTATGGGGTAAAGTTAAAGATATTAATGTGACGAAACAAGAGCCAACACAATCAAACATAGAGGATGATGAAAGAAGTAATATAATAGATTTGGAAGAACCACTTATTGTAGAGAAATCAAAATCTTTAGCAGAGATGAAAATGGAGGGCTGA 1101 0.3615 MSGLLIVMIMIGLQIHYTVLAILIKHAFSDGLSPTIYVMYRQGIATLALAPFIFLSNKRRRSLRSSLGLKGISWMFLTSLFGVTVNQNAYFCGLYYASSTVATAMTNLIPAFTFVLAALLGFEKIDLRSLRSIAKILGTICCVSGALTIAFLKGNKLVLMEFSLSDPKYLTASGDDNWILGCLLLLASSIFWACWMIMQIPISSYCPDHMLSSFWMCLFATIQSAIFVVIQENHVQSRILHSPLQISCILYSGIGIAISFFVQSWCISQRGPLYCVMFNPLAAVFTALVATTFLHEQLYVGSLVGALGVIVGLYFVLWGKVKDINVTKQEPTQSNIEDDERSNIIDLEEPLIVEKSKSLAEMKMEG 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04617 366 Pfam EamA-like transporter family 180 317 IPR000620 GO:0016020
Vifa4g04617 366 Pfam EamA-like transporter family 8 143 IPR000620 GO:0016020
Vifa4g04617 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 320 - -
Vifa4g04617 366 PANTHER WAT1-RELATED PROTEIN 7 328 IPR030184 GO:0016020|GO:0022857
Vifa4g04617 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04617 Vifa-Chr4 1465849885 1465851651 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04617 7 363 Nodulin-like Gene Family AT4G30420 42.818 1.11e-102 306
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04617 4 1465849885 1465851651 Vifa4g04617 4 1465849885 1465851651 ECH