Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04614 ATGCTCTGTAACAGCCACCCAAGCAAACAACGTCAATGTTACCTTTCCTACCATCCTCTTTGCCGAAGATTCGTGGTGGCAAAAGGTGGCACCATCGTCTTCTTCGGTGTTCACCAACTTAAAATCAACAAATACTCACTCAAAAGCCCCACCACTCTCATCTTTCAAGCACTTAAATTCTTCCCCTTACATTACTTCATCATCTTCTCATTTTCCACTTTTCTTCCATATCTCTCATCAAAACTCACTCATAATTTCTCTTCTTCTTCCACTTTATCTCCTTTCAAGAGTTTGAGTAAGAGAATGCGAAATTTGAGTTCACTGAAGCGAGAATTCTTAAAGAAATGGATAAAGGGTCTAAGAAAATACAACTCTGAAAAGAAGAACATGAACTTGTTGGAGAGAAAGAAAGCCATAAAGCTTTCTGCAGATATAGCCATGGCTTCCACTAAAGACAAAACTACCCTTTGGAGAAAAGCATTTATTACAAACACTTCAACAAGCATAGATCAACAAGGCATATCAACATCATCACCACAAAAGAAGATAACAAAGAAAAACTTGAATAATTCGTGTCGGCTTTATCGAAAAAGGATAATTGGAAGCAGAAAGATCTTGAGAAGAAACCGTGTGAAGGGAAGAGTGGAGGCAAGGTTTATTGCAACCAAGTTGGTTAAGAAAAGAACAAGAACGCTCAAGGGTTTGTTACCAGGTGGAAAATTCATAGATGATGCTTGTTTGGTTGATGAAACCCTAGATTATATACAATCTTTGAAAGCTCAAGTTGAAGTCATGAGATGTCTTGTTACTGCCTCAGAGCTCTTCATTAATCCACCGTAA 840 0.381 MLCNSHPSKQRQCYLSYHPLCRRFVVAKGGTIVFFGVHQLKINKYSLKSPTTLIFQALKFFPLHYFIIFSFSTFLPYLSSKLTHNFSSSSTLSPFKSLSKRMRNLSSLKREFLKKWIKGLRKYNSEKKNMNLLERKKAIKLSADIAMASTKDKTTLWRKAFITNTSTSIDQQGISTSSPQKKITKKNLNNSCRLYRKRIIGSRKILRRNRVKGRVEARFIATKLVKKRTRTLKGLLPGGKFIDDACLVDETLDYIQSLKAQVEVMRCLVTASELFINPP 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04614 279 CDD bHLH_AtIBH1_like 225 269 IPR044549 GO:0006355
Vifa4g04614 279 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 107 270 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04614 102 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 43.889 1.31e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04614 - - lja:Lj0g3v0101119.1 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04614 4 1462685727 1462690711 Vifa4g04614 4 1462685727 1462690711 ECH