Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04561 ATGCAGAGACCAACTACTGACGGAGTTAATATGGGGAAAAGGACCCTGGAGGGTGGAGAAGATGACCAGCCTGAACGAAAGAGGCCTGCTCTTGCCAGTGTAATTGTTGAAGCTCTCAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAACCTATTCTTCGTAGAGTTGTCAGTGAAGAAGTGGAGCGTGCTTTGGCAAAGTTAGGTCCTGCACGACTTAGTGGAACTGGAAGGTCTTCCCCTAAAAGGATTGAAGGTCCTGATGGTAGAAACTTGCGGCTTCAGTTTAGGTCCCGGCTGGCTCTTCCTTTATTCACAGGAGGAAAAGTGGAAGGCGAGCAGGGGGCTCCAGTTCATGTTGTTCTAGTTGATGCCAATAGTGATGATGAAGATTGGACCCAAGAAGAGTTTGAAAGCCATGTGGTGAAAGAACGCGAAGGAAAGAGACCTTTGTTGACTGGGGACCTGCAAGTGACACTGAAGGAAGGAGTTGGAACATTGGGGGAACTGACATTTACAGATAATTCAAGCTGGATAAGGAGCCGTAAATTCAGGCTTGGCATGAAGGTTGCAGCAGGTTTTGGCGAATCTATACGCATTCGCGAAGCCAAGACAGTGGCTTTCATTGTTAAAGATCATAGAGGCGAATTATACAAGAAGCATTATCCTCCTTCGTTTAATGATGATGTATGGAGATTGGAGAAAATAGGCAAGGATGGGTCATTTCACAAAAAGCTGAATAATGCAGGAATATTCACAGTTGAAGACTTTCTTCGACTTGTGGTTAAGGATCAACAGAAATTGCGGAATATCCTTGGGAGTGGTATGTCAAACAAGATGTGGGAAGCTCTCTTAGAGCATGCAAAGACATGTGTTCTAAGTGGGAAGCTTTATGTTTATTATCCAGAGGATACAAGAAATGTTGGTGTTATTTTTAACCATGTCTATGAGCTGCGCGGCCTTATAACAGGAGCCCAATTCTTCTCTGCTGATTCTCTCAGTGATAATCAGAAGGTTTATGTAGATTCATTGGTGAAAAAGGCATACGACAATTGGGAGCAGGTTGTAGAGTACGATGGTAAATCACTTATAGATGCTGAGCAAAACAAGAATTCTGCTGTACCTGAAAATGAACTTCATGTTGAGCCAATTGATTTTGATGGTGGTTTAGACCATCAACTGCAAATGCCATCCCTCCCCATGTCTGTTACTTCTGAACACCAGATTAATTCAGGGATGCCAGTTGGAGGTTATATCAATAATATGGTGACAAGGTATCCAAGCCAGGCATTGATCGGAAGTTCCAGCTCTCGGAGTCAGTTTGAAGGCTCATTATATCTGTCTAATGATCAATTAATAAACAATGATCACCAATCCCTAAGCTCTAGAAATGATCATAGCACAGTTGGTTTGGCTCTTGGTCCTCCTCAATCTTCGACATCAGGTTTCCATGCTGGTAGCTCTTCTATTCAACCATCTGCACCAAATCCTTTTGATGATTGGTCACACACCAGGGACAAGGGCGTTGATGACTTCTTTTCGGAGGATGAAATCCGTGTTAGAAGTAATGAGATACTAGAGAATGAAGACATGCAGCACTTGCTCCGCCTTTTCAGTATGGGTGGTCATGCTTCCATGAATGCCGATGATGGTTATTCCTTCCCATCATTCATGCCATCTCCTATGCCGAACTACGATGAGGACCGCTCTCGTCCTGGCAGAGCTGTCGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGAAAGATAGCAGCTGAGAAGCGGGCTCAGATAGAGGAGTTAGATGAGTAG 1833 0.443 MQRPTTDGVNMGKRTLEGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLSGTGRSSPKRIEGPDGRNLRLQFRSRLALPLFTGGKVEGEQGAPVHVVLVDANSDDEDWTQEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGMKVAAGFGESIRIREAKTVAFIVKDHRGELYKKHYPPSFNDDVWRLEKIGKDGSFHKKLNNAGIFTVEDFLRLVVKDQQKLRNILGSGMSNKMWEALLEHAKTCVLSGKLYVYYPEDTRNVGVIFNHVYELRGLITGAQFFSADSLSDNQKVYVDSLVKKAYDNWEQVVEYDGKSLIDAEQNKNSAVPENELHVEPIDFDGGLDHQLQMPSLPMSVTSEHQINSGMPVGGYINNMVTRYPSQALIGSSSSRSQFEGSLYLSNDQLINNDHQSLSSRNDHSTVGLALGPPQSSTSGFHAGSSSIQPSAPNPFDDWSHTRDKGVDDFFSEDEIRVRSNEILENEDMQHLLRLFSMGGHASMNADDGYSFPSFMPSPMPNYDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04561 610 Pfam Calmodulin binding protein-like N-terminal domain 129 215 IPR046831 -
Vifa4g04561 610 Pfam Calmodulin binding protein C-terminal domain 298 360 IPR046829 -
Vifa4g04561 610 PANTHER OS02G0177800 PROTEIN 129 533 IPR012416 GO:0005516
Vifa4g04561 610 MobiDBLite consensus disorder prediction 14 28 - -
Vifa4g04561 610 MobiDBLite consensus disorder prediction 458 500 - -
Vifa4g04561 610 MobiDBLite consensus disorder prediction 1 28 - -
Vifa4g04561 610 Pfam Calmodulin binding protein central domain 229 293 IPR046830 -
Vifa4g04561 610 MobiDBLite consensus disorder prediction 458 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04561 Vifa-Chr4 1443149634 1443154008 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04561 1 605 Calmodulin-binding Proteins AT5G57580 63.537 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04561 - - cam:101488801 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04561 4 1443149634 1443154008 Vifa4g04561 4 1443149634 1443154008 ECH