Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04557 ATGGAATTTGATACTGTTAATGAAGCTTATGCATTGAATGGTAAATGTAAAGGTTTTTCCATTAGGAAAAGTGATGTTAGGACAAGAGGGCCTGAAGGAAAAAAGGTAGTAGTAATGAGGCAATATGTATGCAATAAACATGGCTTAAGAGAGAAGAAACACTTATGTAGGATTGAAAGGAAAAGAGATCACAACCGTTTGACAAGTACTAAATGTGCAGCTAGGCTTCGTGTGCACTACAAAGCCAAAAAGGGTAGATATGTAGTATCAATTTTTGAAGAGGCTTATAACTATGAATTAACCCCATCTAGGTTTGTGCACTTACACCCCATTTATCGTGAAATTTATGAAGTAGATAGAGCTCAGATTGATGGTCTTCAGTCACATGGAATTAGAACTTGTCATATAATGGGGTAA 417 0.3597 MEFDTVNEAYALNGKCKGFSIRKSDVRTRGPEGKKVVVMRQYVCNKHGLREKKHLCRIERKRDHNRLTSTKCAARLRVHYKAKKGRYVVSIFEEAYNYELTPSRFVHLHPIYREIYEVDRAQIDGLQSHGIRTCHIMG 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04557 138 Pfam FAR1 DNA-binding domain 11 101 IPR004330 -
Vifa4g04557 138 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04557 Vifa-Chr4 1442908254 1442908819 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vifa4g04557 FAR1 5.9e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04557 - - tpra:123910027 216.083