Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04503 ATGGCAACCAACGAGGATCAAAAGCAAACTGAATCTGGAAGACACTCAGAGGTTGGTCACAAGAGTCTTCTCCAAAGTGATGCTCTTTACCAGTATATTCTAGAGACCAGTGTTTTCCCAAGAGAACATGAAGCCATGAAAGAATTGAGAGAGATCACAGCAAAACACCCATGGAACCTCATGACAACCTCTGCAGACGAAGGACAATTTTTGAGCATGCTCCTTAAACTCATCAATGCTAAGAACACCATGGAAATTGGTGTCTACACTGGCTACTCCCTTCTTGCCACTGCCCTTGCCATTCCTGAAGACGGAAAGATTTTAGCTATGGATATTAACAAGGAGAATTACGAACTGGGTCTTCCTGTGATAAAAAAAGCTGGAGTTGATCACAAAATTGATTTCAGAGAAGGTCCCGCTCTACCAGTTCTTGATGAAATGGTTAAAGATGAAAAGAATCATGGGAGTTACGATTTCATTTTTGTGGATGCGGATAAGGACAATTACATCAACTACCATAAGAGGTTGATTGATCTTGTGAAAGTGGGAGGTGTGATCGGCTACGACAACACCCTATGGAATGGATCTGTGGTCGCACCTCCTGATGCTCCTCTCAGAAAGTATGTTAGGTACTACAGGGATTTTGTTTTGGAGCTTAACAAGGCTTTGGCTGTGGACCCTAGGATTGAAATCTGTATGCTTCCGGTTGGTGATGGAATCACTATCTGCCGTCGGATCAAGTGA 744 0.4315 MATNEDQKQTESGRHSEVGHKSLLQSDALYQYILETSVFPREHEAMKELREITAKHPWNLMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMVKDEKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITICRRIK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04503 247 FunFam Caffeoyl-CoA O-methyltransferase 1 15 247 - -
Vifa4g04503 247 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 22 246 IPR002935 GO:0008171
Vifa4g04503 247 Gene3D Vaccinia Virus protein VP39 21 247 IPR029063 -
Vifa4g04503 247 PANTHER O-METHYLTRANSFERASE-RELATED 20 246 - -
Vifa4g04503 247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 245 IPR029063 -
Vifa4g04503 247 Pfam O-methyltransferase 36 246 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04503 Vifa-Chr4 1424817294 1424818412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04503 5 246 Monolignol Biosynthesis Gene Families AT4G34050 89.256 1.63e-168 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04503 K00588 - gmx:100811247 468.388