Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04477 ATGGAGCGGGTCGTTGGAAGACCCGGATCCAAGGAAAAACGCAGGGCTGTAACAAGAAAGAAAAAAAACCCTTGGAATCGCTGTGTGTTGTGGCCGCCGCTGATGAATTCCCAACCATCAACCTCCATTCCGTTTCAACCAACGCAAACAAACATCCTCACCTCAAAAACGCCACAAATCAAACCCAGAACGCGAGAGGAGAAACGGAAACGCAGAAGAGAGAAAGAAGAAACGGTGCAGAGAATAACAAATTATGAATCGGTTTTGGATTTCGCTGCATCACCAAAATCAAGATCTACCAAAGCTTGCTTCCGACAGGTGATGAAGAACCAAGAGGCAGTGAATCTTATCAGGCACATAGAGGATCCACAAGAAGCAGCTGAATGCCTAGCTAAGGAAGCATTGGTTAGGAGGAGCAAAGGCAACATTTCATGTTTAATCATTCGATTCGATTGA 456 0.4539 MERVVGRPGSKEKRRAVTRKKKNPWNRCVLWPPLMNSQPSTSIPFQPTQTNILTSKTPQIKPRTREEKRKRRREKEETVQRITNYESVLDFAASPKSRSTKACFRQVMKNQEAVNLIRHIEDPQEAAECLAKEALVRRSKGNISCLIIRFD 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04477 151 MobiDBLite consensus disorder prediction 33 59 - -
Vifa4g04477 151 MobiDBLite consensus disorder prediction 1 79 - -
Vifa4g04477 151 SUPERFAMILY PP2C-like 106 151 IPR036457 -
Vifa4g04477 151 Gene3D - 104 151 IPR036457 -
Vifa4g04477 151 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04477 Vifa-Chr4 1413984171 1413985133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04477 106 150 PP2C-type Phosphatase Gene Family AT3G23360 75.556 1.64e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04477 K19704 - gmx:100794054 87.4261