Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04474 ATGGAGGCACAAGAACAAAATAAACGTAGACGTGATTATTGTATGGAACCAAACAAAATAGCTCAATCTATATTTGCTAGAAAATATTTAAGCTATTTAGTTCCAGCATTGATGAAGATAAAGGAAAACCCTAGTTTTGCAAAAGAAAACAACAGCGGTTATGTTAAGTATGAAGTGGATATGGCAATGGTTTTATCAGCACAAGGTTGTGCATGGAGTAATGGTCTTAAACTCAAGCTTCAAAAGGATCATGTTAAGGGTAATGAGGGTAATGAGAGTAATGAAGATAATGAAGAGGAGGAAAAGATGAAGAATTTGATAAAGTTGATACCTGGTGGTGAAGAGATTTGTGATGAACAAGTTGTTTGTGAAGTAGAAAGTTATATAAGATGTTTGGAAATGCAGGTGAATGTTCTTCAATGCCTGCTTGAAGAGATGTGTTGA 444 0.3468 MEAQEQNKRRRDYCMEPNKIAQSIFARKYLSYLVPALMKIKENPSFAKENNSGYVKYEVDMAMVLSAQGCAWSNGLKLKLQKDHVKGNEGNESNEDNEEEEKMKNLIKLIPGGEEICDEQVVCEVESYIRCLEMQVNVLQCLLEEMC 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04474 147 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 23 144 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04474 Vifa-Chr4 1412700731 1412701174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04474 1 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 38.125 5.69e-27 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04474 - - cam:101501101 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04474 4 1412700731 1412701174 Vifa1g09019 1 1431894942 1431895466 PCT