Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04352 ATGGAGGAAATATCTTCGAGTGTTGCGGTACCGTTTACGCTTGGAAATTTGATTCAGAAAGATGCTGCGGTTACGACTCACATGGAGATAACCGGGTTAAAGCTTATGGCAAATACTGCGGCTGCTTTGATGTTAAATCCTGCAGCTGGAAATGAAGACCGTGCTGATGTTAGTCTGCAACGTCAGATTATGGTATCTGCGGAGGTAAAGGAGAATCAAGTTGGAGTTGTTTCGGAAATGGTGATTGAGTGTGAGAGTAATTGGGTTTTGAGTGAAAGTGGTAGACAGACAAATAAGGAAGATGAAATCATGTTAGCTGTGGATTTTCAGTGTGTGCATGATTCGGGATCTCAATCTGGGGCCGATTCGTCAATAATTGTGACGGTTGGTGATGATATTCATGGTAAGTTTAGTAGTATAAATGAGGTGCTTCCGGGGCTAAAGCCAGAGCCGAATACGGTTTCGATTACAATGGATGTTGAGAGTGAAAATCGATGTGCATCAGTAGAGGCTGATCCGAAACTATCTGCTATGATTGTTGATCAGTTGCCTGAGGAGAACAAAACGCCGAGAACAAGCAACCAGAATGGGTTAGAATTGCGTAATGGTCCTCTTTGGGGTTTCTCGACAATCTGTGGAAATAGACCGGAGATGGAAGATGCTGTTGCTGTTAAACCTCAACTTTTTCAAGTCCCTTCGCGGATGCTTATGGATGATGAACATGTAAATGAAAACTCAAAATACTCACCAGCCCATTTTTTCAGTGTCTATGATGGACATGGGGGATTTCAGGTTGCCAATTACTGCCGGGAACGTCTTCACTCAGTGTTGATTGAGGAGATTGAAGCTCAACAATCCAGTTTGGCAGAAACAAATGGGAGAAATGATTGGCAGGAAGTTTGGAAGAAAGTATTGTTCAACTGTTTTCAGAAAGTTGACAACGAGGTTGGCGGAATCGGTGCAGGAAGTAGCGGAAGTAACGGTGGGGGATCTGAGTCTAACATTGAACCTATTGCTCCCGAGACTGCTGGCTCCACTGCAGTGGTTGCCATTTTAAATCAAACCCACATAATAGTTGCAAACTGCGGGGATTCAAGAGCTGTCTTGTATCGCGGGAAAGAAGCCATGGCGTTGTCTGTTGACCACAAACCGAATAGAGAGGACGAGAGAGCAAGAATAGAAGCTGCAGGAGGGAGAGTCATACATTGGAAAGGATACCGAGTTCTTGGTGTCTTGGCGATGTCGAGGTCCATAGGTGATAGATACTTGAAACCATGGATAATTCCAGAACCAGAAGTTAATATTATGCATAGAGAGAAAAACGACGAGTGTCTAATTATAGCAAGTGATGGTTTATGGGATGTAATAACAAACGAAGAAGCCTGTGAAGTTGCAAGGAAGAGAATCCTTCTCTGGCACATGAAGTATGGCGACAATGGAACAACAGTATATGACAAAGGAGAAGGAGGAGTTGATCTTGCATCTCAGTCTGCTGCAGAGTATCTATCTAAACTCGCCCTCCATAGAGGAAGTGGCGATAACATCTCTGTAATAGTGATAGATTTAAAGCCTGTGAGAAAATTGAAGAGAAAGTCATAA 1599 0.434 MEEISSSVAVPFTLGNLIQKDAAVTTHMEITGLKLMANTAAALMLNPAAGNEDRADVSLQRQIMVSAEVKENQVGVVSEMVIECESNWVLSESGRQTNKEDEIMLAVDFQCVHDSGSQSGADSSIIVTVGDDIHGKFSSINEVLPGLKPEPNTVSITMDVESENRCASVEADPKLSAMIVDQLPEENKTPRTSNQNGLELRNGPLWGFSTICGNRPEMEDAVAVKPQLFQVPSRMLMDDEHVNENSKYSPAHFFSVYDGHGGFQVANYCRERLHSVLIEEIEAQQSSLAETNGRNDWQEVWKKVLFNCFQKVDNEVGGIGAGSSGSNGGGSESNIEPIAPETAGSTAVVAILNQTHIIVANCGDSRAVLYRGKEAMALSVDHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIMHREKNDECLIIASDGLWDVITNEEACEVARKRILLWHMKYGDNGTTVYDKGEGGVDLASQSAAEYLSKLALHRGSGDNISVIVIDLKPVRKLKRKS 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04352 532 PANTHER PROTEIN PHOSPHATASE 178 522 IPR015655 GO:0004722|GO:0006470
Vifa4g04352 532 FunFam Protein phosphatase 2C 16 193 532 - -
Vifa4g04352 532 SUPERFAMILY PP2C-like 202 524 IPR036457 -
Vifa4g04352 532 ProSitePatterns PPM-type phosphatase domain signature. 253 261 IPR000222 GO:0043169
Vifa4g04352 532 Gene3D - 194 532 IPR036457 -
Vifa4g04352 532 Pfam Protein phosphatase 2C 237 515 IPR001932 -
Vifa4g04352 532 ProSiteProfiles PPM-type phosphatase domain profile. 205 522 IPR001932 -
Vifa4g04352 532 SMART PP2C_4 195 520 IPR001932 -
Vifa4g04352 532 CDD PP2Cc 207 522 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04352 Vifa-Chr4 1376100174 1376102209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04352 181 531 PP2C-type Phosphatase Gene Family AT4G26080 56.780 2.92e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04352 K14497 - gmx:100789207 712.99