Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04310 ATGGCATCTTCAACCTCAATATTCTATCTTCTCACAATGCTATTGTTATCAGTGACAGAAATGGCTTTGGCGACCAAAAAGACTTACATAGTTCACATGAAACACAACCACAATGCTTATGATTCTATGTCTATGTTCTCTTCCACTCTCCAATCTACTTCTGATTCCATACTATATACCTACACTACCTCTTACAACGGTTTCGCTGTTTTTCTTGATACTCAACAAGCGCAAACATTGCGTGGTTCTGATAATGTTCTGGGGGTGTACGAAGATACACTGTACGAGCTACACACTACCCGCACCCCTGAGTTTTTGGGTTTGCTTCAAATTCAAACCCATTCTCAGTATCTTCATCAACCTTCATACGATGTTGTTATCGGTGTTCTTGACACTGGCGTTTGGCCAGAATCACAGAGCTTTCATGATTCTGAAATGCCACCAATCCCATCTCGATGGCGTGGAAAGTGTGAGTCTGCACCAGATTTCGATTCTTCTCTTTGTAACAAAAAGCTTATCGGTGCCAGAAGCTTCTCCAAGGGCTATCTCATGGCTGCTAACGGAGGTGGTAGAAAGAAAACAGTTGACCTTGTTTCACCTCGCGACAGAGAAGGACACGGTACTCATACTGCCACAACCGCCGCTGGCTCCGCCGTTGCTAATGCTACTCTTCTCGGTTATGCTACCGGTACAGCACGTGGTATGGCACCTCAGGCGCGTGTTGCTACTTATAAAGTTTGCTGGAGTGACGGCTGTTTTGCCTCTGACATACTTGCTGGTATAGATCAGGCGATTCAAGACGGTGTTGATGTTCTATCGATTTCCATCGGCGGTGCTTCCTCCACTCCTTACTACTTTGACACCGTCGCAATCGGAGCCTTTACGGCGGTGGAGAAGGGGATATTCGTTTCGTGTTCAGCGGGGAATACTGGACCTCGGAGTGGTTCGTTATCGAATGTAGCTCCGTGGATCATGACCGTCGGAGCAGGGACGCTAGATCGGGATTTCCCAGCTTACGCTACAATCGGAAACGGAAAAAGATTCTCCGGCGTTTCGCTTTACAGTGGAGAAGGAATGGGAGACGAACCGGTTAGTTTGGTTTATTTCAACGAACGGTTCAATTCATCCAGCAGCATATGTATGCCCGGTTCACTTGACCCGGAAATCGTACGCGGGAAAGTGGTAGTTTGTGATAGAGGTGTGAACTCACGTGTTGAAAAAGGCACAGTGGTGAGCATCGCCGGCGGAGTTGGGATGATTCTGGCAAACACGGCGTCGAGCGGCGAGGGATTGGTCGCTGACAGTCACTTAGTACCTGCCGTAGCTGTGGGAAAAAACGAAGGCGATGAGATTAGAGAATACGCATCGTTAGATCGTAATCCAACGGCTGTCCTTAGTTTCGGTGGAACTGTATTGAACGTGAGACCTTCGCCCGTGGTAGCATCTTTCAGCTCTCGTGGGCCCAACGGTGTGACTCCTCAAATTCTCAAACCAGATGTTATTGGACCTGGCGTCAACATCTTAGCTGGATGGACCGGTGCTGTTGGGCCCTCGGGCTCACTAGATAGTCGCAAAACCCAATTCAACATCATGTCTGGTACATCAATGTCATGTCCGCACATAAGTGGAGTAGCTGCGTTGCTGAAAGCGGCGCATCCAGATTGGAGTCCAAGTGCCATCAAATCAGCTTTGATGACAACAGCATACACACATGACAACACTGAGTCTCCTCTAAGGGATGCAACTGGAGAGGCTTTATCCACACCATGGGCTTATGGGGCCGGTCATGTCAACCCACAAAAGGCCCTATCTCCTGGTCTTGTTTATGATTTAGACACCAACGATTACATACCATTCTTGTGCTCCTTAAACTACACACTTGACCATGTGAAACTCATTGTCAAGCGTCCTAATGTTAATTGTTCCAACTCTTTGTCTGATCCTGGTGAACTCAATTACCCATCATTTTCCGTTGTTTTTGGAAACAATAGTGTTGTTGTTCAATATAAGCGTACATTAACTAACGTTGGGGAGACAGAATCCGTTTATGATGTGGCCGTTACTGGACCATCCACGGTGGGGATAACGGTGAGTCCTACAAAGCTTGTGTTTCAACAAGTTGGAGAAAGGCAAACATATACGGTGAACTTTGTCTCCAACAAAGATGCTTTTGATGATTTGGGTACGTCTGAATTTGGCAGTATTACATGGAGCAACAAACGACATCAAGTTAGGAGCCCAGTTGCTTTTACATGGACCAATTTATGA 2268 0.4678 MASSTSIFYLLTMLLLSVTEMALATKKTYIVHMKHNHNAYDSMSMFSSTLQSTSDSILYTYTTSYNGFAVFLDTQQAQTLRGSDNVLGVYEDTLYELHTTRTPEFLGLLQIQTHSQYLHQPSYDVVIGVLDTGVWPESQSFHDSEMPPIPSRWRGKCESAPDFDSSLCNKKLIGARSFSKGYLMAANGGGRKKTVDLVSPRDREGHGTHTATTAAGSAVANATLLGYATGTARGMAPQARVATYKVCWSDGCFASDILAGIDQAIQDGVDVLSISIGGASSTPYYFDTVAIGAFTAVEKGIFVSCSAGNTGPRSGSLSNVAPWIMTVGAGTLDRDFPAYATIGNGKRFSGVSLYSGEGMGDEPVSLVYFNERFNSSSSICMPGSLDPEIVRGKVVVCDRGVNSRVEKGTVVSIAGGVGMILANTASSGEGLVADSHLVPAVAVGKNEGDEIREYASLDRNPTAVLSFGGTVLNVRPSPVVASFSSRGPNGVTPQILKPDVIGPGVNILAGWTGAVGPSGSLDSRKTQFNIMSGTSMSCPHISGVAALLKAAHPDWSPSAIKSALMTTAYTHDNTESPLRDATGEALSTPWAYGAGHVNPQKALSPGLVYDLDTNDYIPFLCSLNYTLDHVKLIVKRPNVNCSNSLSDPGELNYPSFSVVFGNNSVVVQYKRTLTNVGETESVYDVAVTGPSTVGITVSPTKLVFQQVGERQTYTVNFVSNKDAFDDLGTSEFGSITWSNKRHQVRSPVAFTWTNL 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04310 755 CDD PA_subtilisin_like 339 463 - -
Vifa4g04310 755 Pfam Fibronectin type-III domain 650 749 IPR041469 -
Vifa4g04310 755 Pfam Peptidase inhibitor I9 28 98 IPR010259 -
Vifa4g04310 755 ProSiteProfiles Serine proteases, subtilase domain profile. 103 603 - -
Vifa4g04310 755 Pfam PA domain 388 451 IPR003137 -
Vifa4g04310 755 SUPERFAMILY Subtilisin-like 97 607 IPR036852 GO:0004252|GO:0006508
Vifa4g04310 755 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
Vifa4g04310 755 FunFam Subtilisin-like protease SBT1.5 620 753 - -
Vifa4g04310 755 SUPERFAMILY Protease propeptides/inhibitors 27 95 - -
Vifa4g04310 755 Gene3D - 333 472 - -
Vifa4g04310 755 Pfam Subtilase family 124 573 IPR000209 GO:0006508|GO:0008236
Vifa4g04310 755 CDD Peptidases_S8_3 95 569 IPR034197 -
Vifa4g04310 755 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Vifa4g04310 755 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Vifa4g04310 755 PRINTS Subtilisin serine protease family (S8) signature 122 141 IPR015500 -
Vifa4g04310 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 98 IPR037045 -
Vifa4g04310 755 FunFam subtilisin-like protease SBT1.5 333 472 - -
Vifa4g04310 755 FunFam Subtilisin-like protease SBT1.5 124 344 - -
Vifa4g04310 755 Gene3D Peptidase S8/S53 domain 124 616 IPR036852 GO:0004252|GO:0006508
Vifa4g04310 755 Gene3D - 620 752 - -
Vifa4g04310 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 749 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04310 Vifa-Chr4 1362458626 1362461023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04310 13 755 Subtilisin-like Serine Gene Family AT2G05920 65.688 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04310 - - gmx:100786523 1137.48